Gene Ping_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3567 
Symbol 
ID4625191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4385479 
End bp4386366 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content39% 
IMG OID639798683 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_944849 
Protein GI119947169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGTA GCCTAAAACT TTTTTTAACC CTTTTACTTT TATTTACGGG GGGGATTGCC 
GCCATACCCA TCCATTATCA AGGAGAAATG GATAATACAA CGTGGAAAAC GGAGCTTAAG
TTCGACCGCT GTGAGATTTA TACGGAAATT CCAGACTGGG GTTTTAAAGT ATCTTTTATT
GCAGAATCGG GTCAGAGTTT ACAGCTGTTG ATTTACTCGC GCATTCATTC TGCGGCAGCC
ATAAAGGAGT CATTTGCCGA GGTTATTAAT GCCCCTTGGT ATGAGCTGCA AGCCTCTCCA
CAAGAGCAGA TTATGGCTGA TAGTATTGGC GAGAATAGTA TTAACTTTCG TCAGGGGGTA
GAGACCATTT TCCAGCATAT GCTCGCCGGC AGCTGGTTAC AATTTTATTC CATGTCGAAT
ACAGAGGTTA TGTATATTGT TTCTCTTCCA ACCACTTCAT GGCAGAAAGA GACCGTTTCT
TTTAATCAAT GCGCGAATCA ATTACCCGTT ATTAATTATG AAGAGATAAA TCAGCTCTCT
TTTAACTATA TTGAAAATCA ATATAAGCTA AATAAAACGC AAACTAAAGA TTTGGTAAAA
CTCAGCGATT ATATTAATAA AGATCAAAGT GTCGTAAAAA TACTGATCGA TGGACACTCG
GATAAGTATG GAAATTCAAG CCAGAACCTC AGATTGTCCA AATTTAGAGC CGATGAAATT
GCACAGACAT TAATTAATAA TTCGGTAAAT ATGGATTTAA TTGAAATACG GGGGCACGGG
GGGCGCTACC CTATAGCGAG CAATGATAGT GCCGAAGGGC GCGAAAAAAA CAGGCGAGTA
TCTATCCGTT TGGTTAAGGC GAATGCAAAA ACAAACAATC TAAATTAG
 
Protein sequence
MSCSLKLFLT LLLLFTGGIA AIPIHYQGEM DNTTWKTELK FDRCEIYTEI PDWGFKVSFI 
AESGQSLQLL IYSRIHSAAA IKESFAEVIN APWYELQASP QEQIMADSIG ENSINFRQGV
ETIFQHMLAG SWLQFYSMSN TEVMYIVSLP TTSWQKETVS FNQCANQLPV INYEEINQLS
FNYIENQYKL NKTQTKDLVK LSDYINKDQS VVKILIDGHS DKYGNSSQNL RLSKFRADEI
AQTLINNSVN MDLIEIRGHG GRYPIASNDS AEGREKNRRV SIRLVKANAK TNNLN