Gene Ping_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3558 
Symbol 
ID4625182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4376888 
End bp4377592 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content40% 
IMG OID639798674 
Productflagellar basal body P-ring biosynthesis protein-like protein 
Protein accessionYP_944840 
Protein GI119947160 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGAA TTTTAATTCT GCTTTTAGCC TTTTTAGCGA GTTATTCTTC GGCCCTTGAA 
GTTTCGCAGC TCACGACTAT TGTAAAAAAA CAGATCAATA CCGACAGCGC TACGTTTGCC
CGGAAAATGG ATTGGCAGGA ATACCGTTAC AGCAGTACGC TGCGTATTCC GCCATCATTA
AAAAAACTTG AGGATTGTTT GTCGCCTGTC ATTATTAGTC TGGCGGCAGC TAATGCTATT
AACCGCGTCA GCTATAAAGT GACATGTGAT AATACGGTTA AGCAACACAA ATGGTCAGTC
AATATTGTCG CCAATATTAA TTATTATATG GCGGTTGCTA CCACTGCTTC ATCATTACCC
CGTGGGCATT CCCTGCAGCC TGAGGATATT GTCTTTCGTG AACAGAGAAT AAGAAATAAT
GATTATTATC CGAATGTTGC CGGTCTTGCG GGGAAAAAAA CAAAACGCAA ATTACGTGCA
GGCAGCATTA TAAAAAAGAA AGATATAATC ATAGAATATG CGGTAATACG AAAATCTGAA
GTGAGCATTA TATTCAAGCA GGATTCTTTT TCTTTGAGTA CCCTTGGTAT CGCGCTTAAA
TCAGGCCAGC TTGGTGATTT AATCAAGGTC AAAAATAAAC GTTCGGGTAA TATTATTACC
ACCACGGTGA TCGGCAAAAA TAAAGTGTCC GTTGAGTCCA AATAG
 
Protein sequence
MRRILILLLA FLASYSSALE VSQLTTIVKK QINTDSATFA RKMDWQEYRY SSTLRIPPSL 
KKLEDCLSPV IISLAAANAI NRVSYKVTCD NTVKQHKWSV NIVANINYYM AVATTASSLP
RGHSLQPEDI VFREQRIRNN DYYPNVAGLA GKKTKRKLRA GSIIKKKDII IEYAVIRKSE
VSIIFKQDSF SLSTLGIALK SGQLGDLIKV KNKRSGNIIT TTVIGKNKVS VESK