Gene Ping_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3554 
Symbol 
ID4625268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4372589 
End bp4373050 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content40% 
IMG OID639798670 
Productsugar-phosphate isomerases, RpiB/LacA/LacB family protein 
Protein accessionYP_944836 
Protein GI119947156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.449556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG CAATGGCCTG TGACCACTCT GGTTTTAGTT TAAAAGAGGA GGTCAAAATG 
TTATTAGAAA ATGCCGGGCA TACTATTATA GATTTTGGCG CAAATAACCA GGAGGCTTGT
GATTTATCCG ATCATATTTA CCCGGCAGCA TTAGCCGTTG CTAAAGGTGA AGCTGAGCGA
GGCATTTTTA TTGATGGCGT CGGTTATGGC AGTGCGTTAA TCGCTAATAA AATTTCGGGA
TTGTATGCGG CGGTCTGCCA AGACCCTTTT TGTGCGCAAC TCGCACGGTC TCATTCAAAC
ACCAATATCC TTTGTATTGG TGCCAAAATA ATTGGCTCTG GTATTGCTGC TGAGATTGTC
AATACCTGGA TGACCACAGA ATTTCTTAGC GGTGATGCAA AATATAAAAA ACGTGTTGAT
AAAATAGTTG AAATAGCAAA TAAACACCTA AAACCGTTAT AA
 
Protein sequence
MKIAMACDHS GFSLKEEVKM LLENAGHTII DFGANNQEAC DLSDHIYPAA LAVAKGEAER 
GIFIDGVGYG SALIANKISG LYAAVCQDPF CAQLARSHSN TNILCIGAKI IGSGIAAEIV
NTWMTTEFLS GDAKYKKRVD KIVEIANKHL KPL