Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3553 |
Symbol | |
ID | 4625267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4370726 |
End bp | 4372453 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639798669 |
Product | PTS system fructose-specific IIBC protein |
Protein accession | YP_944835 |
Protein GI | 119947155 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.869517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAG CGATAGTCAC AGCATGCCCC AGCGGCATTG CCAACAGTAT TATTGCTGCT GGTTTAATTG AAAAAGCAGT CTCAACATTA AACTGGGAAG CGACAATCGA ATGCCAGTCT AGCGTCAAAT CGGTACAAAT TTTAACACAA CAACAAATTG ATCAAGCCGA CTGTATCGTG ATTGCTGCGA ATACAACGGT TGATCTTAGC CGCTTTCAGG GTAAAAAAGT GTATCAATCT GATATTACGG AATGCCTGGA AAATACAAAA AACTATCTGG AGAACGCAGT TAACAAAGCA CAACTGCTTA TCCAACCCAT AACGAGGAAG ACCACTATGT CAACAACTAA AAAAATTGTT GCAATTACAG CCTGCCCAAC GGGTGTTGCA CACACCTTTA TGGCAGCAAC TGCCTTAGAA GATAAAGCTA AAGAGCTTGG TTATGAAATT AAAGTTGAAA CACGCGGCTC AGTCGGTGCA AAAAACCAGT TAACCGCAGA AGATATTAGC GCGGCTGATC TGGTTATTAT TGCCGCAGAT ATTAGCGTTG ATTTAGCCCG TTTTGATGGC AAAAAATTGT ATAAAACCAG TACTGGTTTA GCCCTTAAAA AAACCGAGCA AGAGATCAAC AAAGCATTTT CTGATGCAGC GATTTATCGC AGCACAGGTG CAGCGGCAAG CAGTGATGGT GAGCAAATGA AAGCATCGTC TGCTATCTAT AAACACCTTA TGTCCGGTGT TTCTCATATG TTACCTGTGG TTGTTGCGGG TGGTTTATTA ATTGCGTTGT CTTTTGTCTT TGGTATCGAA GCCTTTAAAG AGGAAGGTAC ACTTGCAGCG GCATTAATGA CTATCGGCGG AGCTTCCGCT TTTGCGTTGA TGATTCCGGT ATTATCTGGT TTTATTGCCT TTTCGATTGC CGACAGACCC GGTCTTGCAC CCGGTTTAAT TGGCGGTATG TTAGCAAGTT CAACGGGAGC GGGTTTCCTT GGTGGTATCA TTGCAGGTTT CCTAGCAGGT TACACAGCAA AATGGGTTGC CGATAATTTC CCATTGCCAG ATTCTATGGC GGCGCTAAAA CCCATCTTAA TTATTCCTTT GATTGCCAGC TTAGTAACAG GTTTAGTGAT GATCTATGTG GTCGGTACGC CAGTGGCTGC AGTCATGGCC GGACTAACTG ACTTCCTACA AACCATGGGC TCAGGAAATG CTGTCCTATT AGGTATTCTT CTTGGCGCAA TGATGTGTTT CGACCTTGGT GGTCCAGTCA ACAAAACAGC CTATACCTTT GGCGTGGGTC TATTGGCATC ACAAACTTAT GCACCTATGG CGGCGATTAT GGCTGCGGGT ATGGTACCGG CTCTAGGTAT GGGTCTAGCA ACATTCTTAG CTAAATCTAA ATTTATCGCA AGTGAAGCCG AAGCGGGTAA AGCATCATTC GTATTAGGTC TTTGCTTTAT CTCTGAAGGT GCTATCCCCT TTGCCGCACA TGATCCATTA CGCGTAATCC CTTGTTGTAT GGCCGGTGGC GCGTTAACAG GTGCACTGTC TATGTTATTT GGTGCACAAC TACTAGCGCC ACACGGTGGT TTATTCGTAC TGCTTATACC GGGTGCTATC TCACCAGTCC TACTTTACTT AGTAGCGATT GCAGCAGGAA CAGCAGTGAC TGGTATCAGT TACGCCTTCC TTAAGAAAAG CGACCGTAAA GAAGCCGTTG CAGCTTAA
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Protein sequence | MKLAIVTACP SGIANSIIAA GLIEKAVSTL NWEATIECQS SVKSVQILTQ QQIDQADCIV IAANTTVDLS RFQGKKVYQS DITECLENTK NYLENAVNKA QLLIQPITRK TTMSTTKKIV AITACPTGVA HTFMAATALE DKAKELGYEI KVETRGSVGA KNQLTAEDIS AADLVIIAAD ISVDLARFDG KKLYKTSTGL ALKKTEQEIN KAFSDAAIYR STGAAASSDG EQMKASSAIY KHLMSGVSHM LPVVVAGGLL IALSFVFGIE AFKEEGTLAA ALMTIGGASA FALMIPVLSG FIAFSIADRP GLAPGLIGGM LASSTGAGFL GGIIAGFLAG YTAKWVADNF PLPDSMAALK PILIIPLIAS LVTGLVMIYV VGTPVAAVMA GLTDFLQTMG SGNAVLLGIL LGAMMCFDLG GPVNKTAYTF GVGLLASQTY APMAAIMAAG MVPALGMGLA TFLAKSKFIA SEAEAGKASF VLGLCFISEG AIPFAAHDPL RVIPCCMAGG ALTGALSMLF GAQLLAPHGG LFVLLIPGAI SPVLLYLVAI AAGTAVTGIS YAFLKKSDRK EAVAA
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