| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3549 |
|---|
| Symbol | |
|---|
| ID | 4625263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4366325 |
|---|
| End bp | 4367272 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639798665 |
|---|
| Product | urea amidolyase related protein |
|---|
| Protein accession | YP_944831 |
|---|
| Protein GI | 119947151 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
|---|
| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAC TGAAAGTAAT TCAACCGGGA ATGTTATCTC TTATTCAGGA TGTCGGCCGC
TTTGGCGTGG CACAACTGGG TTTAAGTCAA GGTGGTCCGA TTGATCTGCA TGCCTATTGC
TGGGCAAACC ACTTGCTTGC TAATAGCATG CACTGTCCAG TACTTGAAAT CACATTAGGT
CAGGCCAGTT TTACAGCCCA GGAAGATACT ATGGTAGCCC TCACGGGAGC CAATATGATG
GCAACCCTTG ACGGCGTTGC ACACAAAAAC TGGTGTAGCT TTCAAATCAA AAAAGGGCAG
ACACTTAAAC TTGGTTTTGC TCAAACCGGG CTTAGAGCTT ACCTTGCTAT TGCCGGTGGT
TTTGCCGCAC AGAAAATATT TGGCAGCAGC GCCACTGTGA TGCGTAATAA ACTTGGCGGG
CTGGCAAAAG ACGACGATTC CCTTGCCAGA GGAAACAAAA TAGCCGCAGG ACAGTTATTA
ACCGCGGCGA GCATTAACCA GCATCGCACT GTCTGTCGAT CCGTTCCAAA GCATTTTATC
CCGGACTATG CCGATACTAT CGAGATTGGT GTACTGCCGT CCTATCAAGT TGAGCGCTTC
CCTCAATTAC AGCGGGATCG ATTTTTTCAA AGTAGTTTTG CCGTTAGCCC GCAAAGCGAT
CGGATGGGCG TGCGTTTAAC AGGCGCAGCA ATAAAGTGTG ATACTGCCGG CATTATTTCA
GAAGGCATTG CACTTGGCGC GATTCAAATT CCGCCCGACG GACAACCGAT CATACTGCTC
AATGATCGCC AAACTCTGGG AGGTTATCCG AAAATCGGCT GCGTATCACG CTTGGATCTA
CCCAAGATAG CGCAGGCCAG AGCAGGTTCA GTAATCCGCT TTTACGATGC AGATATTGAA
GAAAAATCGT CACAATGGTG TGAATTTTTA GGTTTTTTCA ATATGTAG
|
|---|
| Protein sequence | MSKLKVIQPG MLSLIQDVGR FGVAQLGLSQ GGPIDLHAYC WANHLLANSM HCPVLEITLG
QASFTAQEDT MVALTGANMM ATLDGVAHKN WCSFQIKKGQ TLKLGFAQTG LRAYLAIAGG
FAAQKIFGSS ATVMRNKLGG LAKDDDSLAR GNKIAAGQLL TAASINQHRT VCRSVPKHFI
PDYADTIEIG VLPSYQVERF PQLQRDRFFQ SSFAVSPQSD RMGVRLTGAA IKCDTAGIIS
EGIALGAIQI PPDGQPIILL NDRQTLGGYP KIGCVSRLDL PKIAQARAGS VIRFYDADIE
EKSSQWCEFL GFFNM
|
|---|
| |