Gene Ping_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3548 
Symbol 
ID4625262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4365529 
End bp4366233 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content47% 
IMG OID639798664 
Productallophanate hydrolase subunit 1 
Protein accessionYP_944830 
Protein GI119947150 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC CTATCATCAA GCGGGTATCA GAAACCCATG CCATGATTTA TATCGGGGAC 
ACTATTGCCC CGGAACGGGC ATCTCTAATT GGCTCTCTGT GCGAAAAAAT TCACCTCGAG
GTCGCTGATG GGATTATTGA GGTGGTGCCC TCTTATACCT CGATTATGAT CGAATTCAAT
CTTTTAAAAA TATCCTATGC AACTCTGGAA GCAAGCTTAA TCGAGCTGCT TGGTAGTTTT
GAACAAAAAT CACAAAAAAG CCAGGCAAGA ATTATTGAAC TGCCCGTTTA TTACCACGCT
GATGTGGCAC CGGATTTACG GACGCTGGCT GAAGCGAAGA ATTTATCTGT TCAGCAGGTT
ATCGATATTC ATTGCCAGAC CCTTTATACC GTGTGCGCGA TCGGCTTCTC TCCCGGTTTC
GCCTTTCTTG GCAGCGTCGA TGACCGTATT GTTATGCCCC GTCACGCCAG TCCGCGCCTG
AAAATACCGG CAGGCAGTGT CGGTATTGCG GACCGGCAGA CAGCCGTTTA TCCCGATGAT
TCACCGGGTG GATGGCAGAT TATTGGTAAC TGCCCAAGCA CCTTATTTAA TCCAGAAAAG
GAACCGATGA TGCCGTTTTC TGTCGGTGAC ACGGTACGTT TTAAATCCGT ATCACTAGAA
GAGTTTACTC GGCAAGGAGG ACAAACATGT CCAGACTGGA AGTAA
 
Protein sequence
MKSPIIKRVS ETHAMIYIGD TIAPERASLI GSLCEKIHLE VADGIIEVVP SYTSIMIEFN 
LLKISYATLE ASLIELLGSF EQKSQKSQAR IIELPVYYHA DVAPDLRTLA EAKNLSVQQV
IDIHCQTLYT VCAIGFSPGF AFLGSVDDRI VMPRHASPRL KIPAGSVGIA DRQTAVYPDD
SPGGWQIIGN CPSTLFNPEK EPMMPFSVGD TVRFKSVSLE EFTRQGGQTC PDWK