Gene Ping_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3543 
Symbol 
ID4625257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4361000 
End bp4361512 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID639798659 
Productputative transcriptional regulator 
Protein accessionYP_944825 
Protein GI119947145 
COG category[K] Transcription 
COG ID[COG5631] Predicted transcription regulator, contains HTH domain (MarR family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.397492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.716751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA GTGAATATTT TCCAATCGTA TCTTCATCGC ATTTGATGGG GAAAGATTCC 
GTTACGTTAA GTGAGTTTGA ATATGCGTTA ACTATGCTTA ATAATGCCTT TGAACGTTGG
ATGCTATCGT GCAGTTTTGC CTCGGGGCTT CCTGAGCTGG GGCCGCTTGA TATTCTGGTA
CTTCATAATA TGCATCATCG TGACCGGCCA AAACGGATCG TGGATGTTGC ATTCACTCTC
AATATTGAAG ATATTCATAA TGTCTCCTAC TCGGTGAGGA AACTTGTTAA GCGAGAACTG
GTTGAAAGTG AAAGGCGTGG GAAAGATACT TATTATAAAG TGGCAGAAAG TGGGCGAGAA
TTTTGCGCGG AATATCGCAA GATCCGCGAA AAATGGCTTG TTGATGCTAT CAGCAAGCTG
GGCATTAGCG ATCAACTGGG TGAACTTGCC GCTACCATGA GAACCTTATC GGGTATTTAT
GATCCGGCAT CACGGGCCGT ACGTTCATTG TAA
 
Protein sequence
MKKSEYFPIV SSSHLMGKDS VTLSEFEYAL TMLNNAFERW MLSCSFASGL PELGPLDILV 
LHNMHHRDRP KRIVDVAFTL NIEDIHNVSY SVRKLVKREL VESERRGKDT YYKVAESGRE
FCAEYRKIRE KWLVDAISKL GISDQLGELA ATMRTLSGIY DPASRAVRSL