| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3540 |
|---|
| Symbol | |
|---|
| ID | 4625271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 4357687 |
|---|
| End bp | 4358292 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639798656 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_944822 |
|---|
| Protein GI | 119947142 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0682699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTC TTGCACACTT ACATATTGCG GAGCATACCG GGACCAGCTT CGTAGGGAAT
TTTTTGGGCG ATTTTATTAA AGGAAACCCC AGCGGAAAAT TTAATAGTGA TATTGTGCAG
GGAATTCGTC TGCATCGTTT TGTTGATAGT TATACTGACA GGCATCAATT GGTTAAATTA
GCAAAACCCT TGTTTGCTAA AGAGTTGCGT CGTTACGCAC CGATTGCTTT AGATATGTTT
TGGGATCATT TTCTGGCTAA GCATTGGTCT CAATTTCATC ATTCATCATT AAACGACTTT
TGCCAGCAAG CGCAGTTACA AATTGAATTG GAATCTGCCC GCGAAATAAA TACATTTCCA
GAGCGTTTTA AAAAAACATC AACATTAGTT TGGCAGCAAA AGTGGCTTGA GTCTTACCAA
AAAGTCGATA ATATTCAGTA TGCGCTGGAG TCTATGTCTT TACGCAGTAT AAGAATGGCA
CCATTAGCTT TAACCGGTGA AACCTTAGTT AAGCATTATG CGGCGCTATC GGAAATATTC
TTTGAGTTAT ATTCAGATTT ATTGGATAAA ACAGCTGGTT ATATTACTTA CGAGGGCTAT
AAATAA
|
|---|
| Protein sequence | MNFLAHLHIA EHTGTSFVGN FLGDFIKGNP SGKFNSDIVQ GIRLHRFVDS YTDRHQLVKL
AKPLFAKELR RYAPIALDMF WDHFLAKHWS QFHHSSLNDF CQQAQLQIEL ESAREINTFP
ERFKKTSTLV WQQKWLESYQ KVDNIQYALE SMSLRSIRMA PLALTGETLV KHYAALSEIF
FELYSDLLDK TAGYITYEGY K
|
|---|
| |