Gene Ping_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3535 
Symbol 
ID4624009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4352820 
End bp4353746 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content40% 
IMG OID639798651 
Productoxidoreductase domain-containing protein 
Protein accessionYP_944817 
Protein GI119947137 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.597371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.024361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG CTATTATTGG ACTGGGTGAT ATTGCGCAAA AAGCGCATTT ACCCGTAATT 
ACTCAAATTC CAGGGCTTGA GGTGCTTCTC TGCACGCGCG ATAAAAACAC CTTAAAAAGA
CTGTCTAAGT TGTATCGTAT TGATAGGTTA TATTCAGATT ATAAAGACTT AATTAAAGCC
GGGATCGATG CAGTAATGAT TCATAGCAGC ACGGTTTCCC ATCTGCAAAT TGCGACCTTT
TTTTTACAGC AGGGTATTCC AACCTTTGTT GATAAACCTC TGGCCGATAA TGCCTTTGAT
TGTGAAAGAC TTTATGAGTT GGCTGCAAAG CATCGACAAC CTTTATATCT GGGCTTTAAT
CGTCGTTTTA TTCCTTTGTA TAATCAGTAT CTGCCGAATA TTCAAAATAC CAAAGAGCAT
TCATCTTTAT TATCATTACG TTGGGAAAAA AATAGATTTA ATCAACCAGG TGATATTCGC
ACCTTTATTT TTGACGACTT TATTCATCCA CTGGACAGTA TCAACCTTGA TGCTAAAAAT
AACTTGGATG ATGTCTACCT TACCTGGCAG TCTCAAGGTC AGCGGTTATC CCGTGTAGAT
ATTCAGTGGC AACAACAGAA GACCCTATTG CATGCCTCAA TGAACCGTCT TTATGGTGCG
ACTAAAGAGC GCATTTCAGC GAGTTATGAA AATTGTGCTT TTGAGTTTGA TTCCTTTGTT
TCGGGTAAAT GCTGGCAAGA TAATCAAGAG TCCGTTATTG CTCTTCCTGA CTGGACGCCT
ATGTTAACCG GCAAAGGCTT TACGGGTATG ATCGATGATT GGTTAAGTGT GGTGGAAAAA
GGCAAGTTAG CACCCTCGGT TGTTGAACGT AACCTTGCAA GCCATCAATT AGCCGAACTT
ATTTGCCAAA AGATATGGGT AGAATAG
 
Protein sequence
MKLAIIGLGD IAQKAHLPVI TQIPGLEVLL CTRDKNTLKR LSKLYRIDRL YSDYKDLIKA 
GIDAVMIHSS TVSHLQIATF FLQQGIPTFV DKPLADNAFD CERLYELAAK HRQPLYLGFN
RRFIPLYNQY LPNIQNTKEH SSLLSLRWEK NRFNQPGDIR TFIFDDFIHP LDSINLDAKN
NLDDVYLTWQ SQGQRLSRVD IQWQQQKTLL HASMNRLYGA TKERISASYE NCAFEFDSFV
SGKCWQDNQE SVIALPDWTP MLTGKGFTGM IDDWLSVVEK GKLAPSVVER NLASHQLAEL
ICQKIWVE