| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3528 |
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| Symbol | |
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| ID | 4624002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4346685 |
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| End bp | 4347353 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639798644 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_944810 |
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| Protein GI | 119947130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.894258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00350401 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATTATC AAGCAGCAGT TTTTGATATG GACGGTTTAT TATTGGATAC CGAAAGAGTA
TGCCAAAAGG CATTTCAGGA TGCCTGCCGT CACTTGTCGT TACCCATATT AAATGAGACT
TATTTAAAAA TAATCGGCAC TAACGCCTTA AGTATCAAAA AGATTATTAC CGCAGGTTAT
GGCCCTGAGC TTGATTATGA GAGTTTGCGC GTTGAGTGGA TGAAACGTTA CCATGCGGTG
GTTGATTTCC AGGCCATTCC CGTTAAGGAG GGGGTCATTG CTTTACTCGA CTGGTTACAA
GAGCAGTCCA TTCCGATGGC GGTTGCCACC TCAAGCGAGA AGGACGTCGC ATTAACTAAA
TTAAAATTAT CTGGGTTAGA GGGGTATTTT CAGCAGTTAA GCACCGGATG TGAAGTCACT
CACAGTAAAC CTCACCCGGA GATATTTTTA CTGGCGGCAA AACGCTTAAA TACCGATCCC
ACGGCTTGTT TGGCTTTTGA AGACTCAAAT CATGGTGTTC GGGCAGCCGT GAATGCTGGC
ATGCATGTTT TTCAGGTGCC GGATCTGGTT ACTCCCTGCC CAGAAACGCT GGCTTTAGGG
CATCAAGTTA AGCCTTCATT AAGTGATGTT TTGTCCCGTC TGCAAAATGC TCAGCAAGAA
AATCAATAA
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| Protein sequence | MNYQAAVFDM DGLLLDTERV CQKAFQDACR HLSLPILNET YLKIIGTNAL SIKKIITAGY
GPELDYESLR VEWMKRYHAV VDFQAIPVKE GVIALLDWLQ EQSIPMAVAT SSEKDVALTK
LKLSGLEGYF QQLSTGCEVT HSKPHPEIFL LAAKRLNTDP TACLAFEDSN HGVRAAVNAG
MHVFQVPDLV TPCPETLALG HQVKPSLSDV LSRLQNAQQE NQ
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