| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3527 |
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| Symbol | |
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| ID | 4624001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4345568 |
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| End bp | 4346260 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639798643 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_944809 |
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| Protein GI | 119947129 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0423129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000538559 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATTAG ATAAATACAT TTGTGAGTCT ACCACTATGA CCAGAAGCCA GGCTAAAAAG
GTCATTATCC AGGGACGTAT AACAAGCGAC GGCACTGTCA TGCGTAATAC GGGTTATAAA
GTATTAGAGA ATACACCAAT CTGTTTTGAT GGTAACTTAA TTAATGTCCG TGGCACACGT
TATATTATGC TTAACAAACC GAAAGATTTT ATCTGCTCAA CTGTTGATGA ACAGTTCCCC
AGTATTATTA ATTTAATAAA AGTTGATAAA CCTGATCAGC TCTGTATTGC AGGTCGACTC
GACGCCGATA CAACGGGTTT AGCACTGATT ACCGATGATG GGCAATGGTC TCACAAAATC
ACCAGCCCGC GCAGAAATTG CAGTAAACGC TATCGCGCCA CACTTGCCCA ACCCGTTGAA
CAAAATGCAG TTACTTTGTT TAAAGAAGGA ATACAACTGA AAAGTGAAAA TGTCCCCTGC
TTACCTGCAA CATTAGAAAT TTTAACGGAC AATGAAGTTT TACTGACCAT TCATGAAGGT
AAATACCATC AGGTAAAACG CATGTTTGCC GCTATTGGTA ATCTGGTAGT CGAACTGCAC
CGCGAGCAGA TTGGTGAAAT TAAGTTAGAT ACAGATCTTA AATTAGGCGA ATGGCGTTAT
TTAACCACCG ATGAAGTTAA CTCGGTTAAA TAA
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| Protein sequence | MRLDKYICES TTMTRSQAKK VIIQGRITSD GTVMRNTGYK VLENTPICFD GNLINVRGTR
YIMLNKPKDF ICSTVDEQFP SIINLIKVDK PDQLCIAGRL DADTTGLALI TDDGQWSHKI
TSPRRNCSKR YRATLAQPVE QNAVTLFKEG IQLKSENVPC LPATLEILTD NEVLLTIHEG
KYHQVKRMFA AIGNLVVELH REQIGEIKLD TDLKLGEWRY LTTDEVNSVK
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