Gene Ping_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3525 
Symbol 
ID4623999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4342822 
End bp4343133 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID639798641 
Productribosomal protein S10 
Protein accessionYP_944807 
Protein GI119947127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000457129 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000321241 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAACC AAAGAATCCG TATCCGCCTT AAAGCTTTTG ATCATAAACT GATCGATCAA 
TCAACGGCGG AGATCGTTGA AACTGCAAAG CGCACAGGTG CTCAGGTACG TGGTCCTATC
CCACTACCTA CTCGTAAAGA GCGTTTCACT ATATTGGTAT CACCGCATGT AAACAAAGAT
GCTCGTGACC AATATGAGAT TCGCACTCAC AAGCGCTTGA TTGATATCGT AGAACCAACT
GAAAAGACTG TTGACGCACT GATGAAGCTA GATTTAGCTG CAGGCGTTGA TGTTCAGATT
AGTTTGGGCT AG
 
Protein sequence
MQNQRIRIRL KAFDHKLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERFT ILVSPHVNKD 
ARDQYEIRTH KRLIDIVEPT EKTVDALMKL DLAAGVDVQI SLG