| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3523 |
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| Symbol | rplD |
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| ID | 4623997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4341548 |
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| End bp | 4342153 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639798639 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_944805 |
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| Protein GI | 119947125 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000876425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000726358 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAATTGG TATTGAAAGA TGCACAAAGT GCTCTTGAAG TTTCTGAAAC TACCTTTGGA
CGTGAATTCA ACGAAGCCCT AGTTCATCAG GTAGTCGTTG CATATGCAGC TGGTGCTCGT
CAAGGTACTC GTGCTCAGAA AACCCGTAGT GATGTTAGTG GTGGTGGTAA AAAACCATGG
CGTCAAAAGG GGACTGGTCG CGCTCGTTCT GGTACAATCC GCAGCCCTAT CTGGGTTGGT
GGTGGTGTTA CTTTTGCTGC ACGTCCTCAG GACCACAGCC AAAAAGTAAA CAAAAAAATG
TATCGTGGCG CAGTGAAAAG TATCCTTTCT GAGTTAGTTC GTCAGGATCG TCTAATCGTT
GTAGAAAAAT TTAGTGTTGA AGCTCCGAAA ACTCAAGAGC TAAAAGCTAA ATTAAAAGAA
CTGGATCTGA AAGATGTTCT AATCATTACT GAAGAATTAG ATGAAAATCT ATTCTTAGCA
GCGCGTAACC TTTACAAAGT AGATGTTCGT GATGTTCAAG GTATTGATCC AGTAAGCCTA
ATCGCATTTG ATAAAGTTTT AGTAACTGCA GCTGCAGTGA AAAAGATTGA GGAGAGCCTA
ACATGA
|
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| Protein sequence | MELVLKDAQS ALEVSETTFG REFNEALVHQ VVVAYAAGAR QGTRAQKTRS DVSGGGKKPW
RQKGTGRARS GTIRSPIWVG GGVTFAARPQ DHSQKVNKKM YRGAVKSILS ELVRQDRLIV
VEKFSVEAPK TQELKAKLKE LDLKDVLIIT EELDENLFLA ARNLYKVDVR DVQGIDPVSL
IAFDKVLVTA AAVKKIEESL T
|
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