Gene Ping_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3521 
SymbolrplB 
ID4623995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4340413 
End bp4341240 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content44% 
IMG OID639798637 
Product50S ribosomal protein L2 
Protein accessionYP_944803 
Protein GI119947123 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000287143 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000119311 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATTG TAAAATGTAA GCCTACCTCT CCAGGTCGTC GCCACTTAGT AAAAGTGGTA 
AACAACGATC TGCATAAAGG TAAACCATTC GCGGCACTTT TAGAGTCTAA ATCTAAATCT
GGTGGTCGTA ATAATGGTGG TCGTATTACG GTTCGTCACA TCGGTGGTGG TCATAAACAA
CACTACCGTA TTGTTGATTT TAAACGTAAT AAAGATGGTA TCCCGGCAAA AGTAGAGCGT
TTGGAATATG ATCCAAACCG TAGCGCAAAT ATTGCACTAG TACTTTACTC TGATGGTGAA
CGTCGCTATA TCCTTGCTCC AAAGGGCTTG GTTGCTGGTG ATCAAATCAT ATCTGGTGAA
GATGCATCAA TCAAAGTAGG CAACTGCTTA CCGATGCGTA ATATCCCTGT GGGTACAACT
GTACACGCGG TTGAGATGAA ACCTGCTAAA GGAGCTCAAA TTGCTCGTTC AGCTGGCGCA
TACAGCCAAA TTGTAGCTCG TGATGGTGCT TATGTAACTC TACGTTTACG TAGTGGTGAA
ATGCGTAAGA TCCCTACTGA GTGTCGTGCG ACAATCGGTG AAGTTGGTAA TGCAGAACAT
ATGCTACGCC AATTAGGTAA AGCAGGTGCT ACGCGTTGGC GTGGTGTTCG TCCTACCGTT
CGTGGTGTTG TAATGAACCC AGTAGATCAC CCACATGGTG GTGGTGAAGG TAAATCAAGT
GGTGGTCGTC ACCCTGTTTC GCCTTGGGGT ATGCCAACTA AAGGCTACAA AACTCGTAAG
AACAAAGGTA CTGATCAGTA CATTGTTCGT CGTCGTAATA AGAAATAA
 
Protein sequence
MAIVKCKPTS PGRRHLVKVV NNDLHKGKPF AALLESKSKS GGRNNGGRIT VRHIGGGHKQ 
HYRIVDFKRN KDGIPAKVER LEYDPNRSAN IALVLYSDGE RRYILAPKGL VAGDQIISGE
DASIKVGNCL PMRNIPVGTT VHAVEMKPAK GAQIARSAGA YSQIVARDGA YVTLRLRSGE
MRKIPTECRA TIGEVGNAEH MLRQLGKAGA TRWRGVRPTV RGVVMNPVDH PHGGGEGKSS
GGRHPVSPWG MPTKGYKTRK NKGTDQYIVR RRNKK