Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3509 |
Symbol | |
ID | 4625509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4335532 |
End bp | 4336065 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798625 |
Product | ribosomal protein L6 |
Protein accession | YP_944791 |
Protein GI | 119947111 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000396017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000010719 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCGTA TAGCTAAGGC ACCGATTACT GTACCTTCTG GCGTTGAAGT TGTAGTAAAT GGTCAAAACG TTGCTGTTAA AGGCAACAAA GGCGAATTAG TTTGTCTTCT TAATGATGCT GTTGTTATTA AGCTTGAAGA GGGTGTGATT AGATTCGCAC CAGCAGAAGG TTTTAAAGAC GGTTGGGCAC AAGCAGGTAC TGCTCGTGCT AACGTTAATA ACATGGTTTT AGGTGTAACT GAAGGCTTTA AGAAGACACT TCTTCTTCAA GGCGTTGGTT ACCGTGCGCA AGTTGCCGGA ACAATAGTAA ATCTAACATT AGGTTTCTCT CACCCGGTTG CTTATCAACT ACCTGAAGGT ATTACTGCAG TGGCTAAAAG CCAAACAGAA ATTATCCTTG AAGGTGCTGA TAAACAAGTT GTTGGTCAAG CAGCTGCGAA GATTCGTGCA TTCCGTCCAC CAGAGCCTTA CAAAGGTAAA GGTGTTCGTT ACGCTAATGA AATCGTGCGT CGTAAAGAAG CGAAGAAAAA GTAA
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Protein sequence | MSRIAKAPIT VPSGVEVVVN GQNVAVKGNK GELVCLLNDA VVIKLEEGVI RFAPAEGFKD GWAQAGTARA NVNNMVLGVT EGFKKTLLLQ GVGYRAQVAG TIVNLTLGFS HPVAYQLPEG ITAVAKSQTE IILEGADKQV VGQAAAKIRA FRPPEPYKGK GVRYANEIVR RKEAKKK
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