Gene Ping_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3509 
Symbol 
ID4625509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4335532 
End bp4336065 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID639798625 
Productribosomal protein L6 
Protein accessionYP_944791 
Protein GI119947111 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000396017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000010719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCGTA TAGCTAAGGC ACCGATTACT GTACCTTCTG GCGTTGAAGT TGTAGTAAAT 
GGTCAAAACG TTGCTGTTAA AGGCAACAAA GGCGAATTAG TTTGTCTTCT TAATGATGCT
GTTGTTATTA AGCTTGAAGA GGGTGTGATT AGATTCGCAC CAGCAGAAGG TTTTAAAGAC
GGTTGGGCAC AAGCAGGTAC TGCTCGTGCT AACGTTAATA ACATGGTTTT AGGTGTAACT
GAAGGCTTTA AGAAGACACT TCTTCTTCAA GGCGTTGGTT ACCGTGCGCA AGTTGCCGGA
ACAATAGTAA ATCTAACATT AGGTTTCTCT CACCCGGTTG CTTATCAACT ACCTGAAGGT
ATTACTGCAG TGGCTAAAAG CCAAACAGAA ATTATCCTTG AAGGTGCTGA TAAACAAGTT
GTTGGTCAAG CAGCTGCGAA GATTCGTGCA TTCCGTCCAC CAGAGCCTTA CAAAGGTAAA
GGTGTTCGTT ACGCTAATGA AATCGTGCGT CGTAAAGAAG CGAAGAAAAA GTAA
 
Protein sequence
MSRIAKAPIT VPSGVEVVVN GQNVAVKGNK GELVCLLNDA VVIKLEEGVI RFAPAEGFKD 
GWAQAGTARA NVNNMVLGVT EGFKKTLLLQ GVGYRAQVAG TIVNLTLGFS HPVAYQLPEG
ITAVAKSQTE IILEGADKQV VGQAAAKIRA FRPPEPYKGK GVRYANEIVR RKEAKKK