Gene Ping_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3508 
Symbol 
ID4625508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4335172 
End bp4335522 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content45% 
IMG OID639798624 
Productribosomal protein L18 
Protein accessionYP_944790 
Protein GI119947110 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000880672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000983533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAAGA AAGCATCTCG TCTACGTCGT GCTACTCGCA CACGTAAGAA GTTACAAGAG 
CTTGGTGCAA CTCGTCTTGT GATTAACCGT ACACCTCGCC ATACTTACGC GCAGGTAATT
ACAGCGGACG CACAAGTCGT AGCAAGCGCT TCTACATTAG AAAAAGAAGT GCGTGCACAA
ATCAGTAACG GTGGTAATAA AGAAGCTGCT CAACTAATTG GTAAATTAGT TGCAGAACGT
GCGGTAGAAA AAGGAATTTC TAAAATTTCT TTTGACCGTA GCGGTTTCCA ATACCACGGT
CGTGTAGCAG CACTAGCTGA AGCAGCTCGT GAAGCTGGAC TCCAGTTCTA A
 
Protein sequence
MDKKASRLRR ATRTRKKLQE LGATRLVINR TPRHTYAQVI TADAQVVASA STLEKEVRAQ 
ISNGGNKEAA QLIGKLVAER AVEKGISKIS FDRSGFQYHG RVAALAEAAR EAGLQF