Gene Ping_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3505 
Symbol 
ID4625539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4334040 
End bp4334474 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID639798621 
Productribosomal protein L15 
Protein accessionYP_944787 
Protein GI119947107 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000855163 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000902196 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAA ATACTCTATC TCCAGCAGCA GGCGCTAAAC ACGCTGCTAA ACGTGTAGGT 
CGTGGTATCG GCTCTGGACT TGGAAAAACT GCTGGCCGTG GTCACAAGGG TCAAAAGTCT
CGTTCAGGCG GTTCTATACG TCCAGGTTTT GAAGGCGGTC AAATGCCTTT GAAACAGCGT
TTACCAAAAT TTGGTTTCAC ATCACGTAAA TCTCTTGTTA GCGGAGAAGT TCGTCTGAAC
GAAATCGCTA AAGTTGATGG TGATGTAGTA ACTATAGAAA CGTTGAAACA GGCTGGTCTA
CTTGTAAACA CTGTTAAGTT TGCAAAAGTA GTTCTTTCTG GTGAGATCTC TCGTTCAGTT
ACAGTACAAG GCCTTCGTGT TACTAAAGGT GCTCGTGCTG CAATTGAAGC TGCAGGCGGA
AAAATCGAGG AATAA
 
Protein sequence
MKLNTLSPAA GAKHAAKRVG RGIGSGLGKT AGRGHKGQKS RSGGSIRPGF EGGQMPLKQR 
LPKFGFTSRK SLVSGEVRLN EIAKVDGDVV TIETLKQAGL LVNTVKFAKV VLSGEISRSV
TVQGLRVTKG ARAAIEAAGG KIEE