Gene Ping_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3502 
SymbolrpsM 
ID4625536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4332067 
End bp4332423 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content46% 
IMG OID639798618 
Product30S ribosomal protein S13 
Protein accessionYP_944784 
Protein GI119947104 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000681032 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000766751 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCCGTA TCGCTGGCAT TAACGTTCCT GATCATAAGC ATGCTGTGAT TGCATTAACT 
GCAATTTTTG GTATCGGTAA AACTCGCTCA CAGATAATCT GTGCAGCGTC TGGTATTGCT
GAATCAACAA AGCTTAAAGA TCTGGATGAG ACACAAATCG AAGCGCTTCG TACAGAAGTA
GCTACGTTCA CCGTTGAAGG TGATTTACGT CGTGAAGTAT CTATGAACAT CAAGCGTCTA
ATGGACCTTG GCTGTTACCG TGGACTTCGT CATCGTCGCA GCTTGCCTGT ACGTGGACAG
CGTTCTAAAA CGAATGCTCG TACTCGTAAA GGTCCGCGCA AAGCAATCAA GAAATAG
 
Protein sequence
MARIAGINVP DHKHAVIALT AIFGIGKTRS QIICAASGIA ESTKLKDLDE TQIEALRTEV 
ATFTVEGDLR REVSMNIKRL MDLGCYRGLR HRRSLPVRGQ RSKTNARTRK GPRKAIKK