| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3499 |
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| Symbol | |
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| ID | 4625533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4330000 |
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| End bp | 4330986 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639798615 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_944781 |
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| Protein GI | 119947101 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0413643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000001114 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGGTT CTGTAATTGA ATTTCTAAAA CCAAATTTAG TTGGTATCGA ACAAATAAAT
GCAACTAGAG CAAAAGTGAC TTTAGGACCG TTAGAACGCG GTTTTGGTCA TACTTTAGGT
AATGCGCTAC GTCGTATTCT GTTATCCTCT ATGCCCGGCA CAGCGGTAAC AGAAGTCGAA
ATTGATGGTG TACAACATGA GTACAGCACT AAAGAGGGCG TGCAGGAAGA TATCCTTGAG
ATACTTCTTA ACCTTAAAGG TCTAGCGGTT AAACTTGAAG GTAAAGACAA TGTTCTAGTC
AGCCTAACTA AATCTGGGGC CGGTCCTGTA ACTGCAGGTG ACATCACTCA TGGTAGTGAT
GTAGAGATAG TCAACCCAGA ACATGTGATC TGTCATTTAA CAGGCAATGC TGAAATCAGC
ATGCGTATTA AAATTGAATC AGGTCGCGGT TATGTTCCAG CTTCATCACG TATTCATACT
GAAGAAGATG AGCGTCCAAT TGGTCGTTTA CTAGTAGACG CGACTTTCAG CCCTGTTGAG
CGTATCGCTT ATAGTGTTGA ATCTGCTCGT GTTGAACAGC GTACCGATTT AGACAAACTT
GTTATCGATA TGGAAACCGA TGGGACACTT GATCCGGAAG AAGCGATTCG TCGTGCAGCC
ACTATTTTGG CTGAACAATT AGACGCATTC GTTGATTTAC GTAAAGTCAG TGAGCCAGTC
GCTAAGGAAG AAAAACCTGA GTTTGATCCT ATTCTCTTAC GCCCAGTAGA TGATCTAGAA
TTAACTGTTC GTTCTGCTAA CTGTTTGAAA GCAGAAACGA TTCACTATAT CGGTGACTTG
GTACAAAGAA CAGAAGTAGA GCTTCTTAAA ACGCCTAATT TAGGTAAGAA GTCACTTACT
GAAATCAAAG ATGTTCTTGC ATCACGTGGA CTTTCTCTGG GTATGCGCCT GGAAAATTGG
CCACCAGCAA GCCTCAGCGA AGATTAA
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| Protein sequence | MQGSVIEFLK PNLVGIEQIN ATRAKVTLGP LERGFGHTLG NALRRILLSS MPGTAVTEVE
IDGVQHEYST KEGVQEDILE ILLNLKGLAV KLEGKDNVLV SLTKSGAGPV TAGDITHGSD
VEIVNPEHVI CHLTGNAEIS MRIKIESGRG YVPASSRIHT EEDERPIGRL LVDATFSPVE
RIAYSVESAR VEQRTDLDKL VIDMETDGTL DPEEAIRRAA TILAEQLDAF VDLRKVSEPV
AKEEKPEFDP ILLRPVDDLE LTVRSANCLK AETIHYIGDL VQRTEVELLK TPNLGKKSLT
EIKDVLASRG LSLGMRLENW PPASLSED
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