Gene Ping_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3496 
Symbol 
ID4625530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4327511 
End bp4328215 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content46% 
IMG OID639798612 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_944778 
Protein GI119947098 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000329165 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACCCG AACGTCTTGC CCGTATTACG AACATGTTAA ATTATCGCCA ACCGGATCTG 
ACCGTATTTT TGGAGCAAGT GCATAAAGCG CATAACTTAG CGGCTATTGT GCGTACTGCG
GACGCTGTCG GCGTGAGTGA TGTGCATGCC ACTTGGGAAA ATAAAACAAC ACAGATTTCA
GGCAATACGG CAACGGGCAG TCAGAATTGG GTCAATCTGC ATTCACATGA AACCCTAGAG
GATGCGGTAA AAGCATTACG TGCTCAGGGC ATGCAGATTA TTGCGACTAA TCTCTCCGAT
AGTGCGATTG ACTTTCGCGA GGTGGATTAT ACCAAACCTA CAGCCATTTT AATGGGCCAG
GAAAAGCATG GCATTAGTCC TGAAGCCCTG GCATTAGCAG ATCAGGATGT GATTATTCCA
ATGGTTGGGA TGTGCCAGTC ATTAAATGTA TCGGTTGCCT CTGCGCTTAT ATTGTATGAA
GCACAACGCC AGCGTGAACT GGCCGGTATG TATAATGGGG AATGCCGTTT ACCCGAGGAG
GAAGCGCATC GCATTTTATT TGAAGGCGGG CATCCTATTT TCACTCAATT GTGCAAAGAG
AGAAATCTCC CTTATCCTCC TCTGGATGAT AAGGGGCAAA TTGATGCTTC TGATGATTGG
TGGCTGGCGG TTCGTTCATC TGTAAAGAGT CTGAAAACTA AATAA
 
Protein sequence
MSPERLARIT NMLNYRQPDL TVFLEQVHKA HNLAAIVRTA DAVGVSDVHA TWENKTTQIS 
GNTATGSQNW VNLHSHETLE DAVKALRAQG MQIIATNLSD SAIDFREVDY TKPTAILMGQ
EKHGISPEAL ALADQDVIIP MVGMCQSLNV SVASALILYE AQRQRELAGM YNGECRLPEE
EAHRILFEGG HPIFTQLCKE RNLPYPPLDD KGQIDASDDW WLAVRSSVKS LKTK