Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3496 |
Symbol | |
ID | 4625530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4327511 |
End bp | 4328215 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639798612 |
Product | tRNA guanosine-2'-O-methyltransferase |
Protein accession | YP_944778 |
Protein GI | 119947098 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000329165 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCACCCG AACGTCTTGC CCGTATTACG AACATGTTAA ATTATCGCCA ACCGGATCTG ACCGTATTTT TGGAGCAAGT GCATAAAGCG CATAACTTAG CGGCTATTGT GCGTACTGCG GACGCTGTCG GCGTGAGTGA TGTGCATGCC ACTTGGGAAA ATAAAACAAC ACAGATTTCA GGCAATACGG CAACGGGCAG TCAGAATTGG GTCAATCTGC ATTCACATGA AACCCTAGAG GATGCGGTAA AAGCATTACG TGCTCAGGGC ATGCAGATTA TTGCGACTAA TCTCTCCGAT AGTGCGATTG ACTTTCGCGA GGTGGATTAT ACCAAACCTA CAGCCATTTT AATGGGCCAG GAAAAGCATG GCATTAGTCC TGAAGCCCTG GCATTAGCAG ATCAGGATGT GATTATTCCA ATGGTTGGGA TGTGCCAGTC ATTAAATGTA TCGGTTGCCT CTGCGCTTAT ATTGTATGAA GCACAACGCC AGCGTGAACT GGCCGGTATG TATAATGGGG AATGCCGTTT ACCCGAGGAG GAAGCGCATC GCATTTTATT TGAAGGCGGG CATCCTATTT TCACTCAATT GTGCAAAGAG AGAAATCTCC CTTATCCTCC TCTGGATGAT AAGGGGCAAA TTGATGCTTC TGATGATTGG TGGCTGGCGG TTCGTTCATC TGTAAAGAGT CTGAAAACTA AATAA
|
Protein sequence | MSPERLARIT NMLNYRQPDL TVFLEQVHKA HNLAAIVRTA DAVGVSDVHA TWENKTTQIS GNTATGSQNW VNLHSHETLE DAVKALRAQG MQIIATNLSD SAIDFREVDY TKPTAILMGQ EKHGISPEAL ALADQDVIIP MVGMCQSLNV SVASALILYE AQRQRELAGM YNGECRLPEE EAHRILFEGG HPIFTQLCKE RNLPYPPLDD KGQIDASDDW WLAVRSSVKS LKTK
|
| |