Gene Ping_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3493 
Symbol 
ID4625527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4323494 
End bp4324351 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content40% 
IMG OID639798609 
Productphospholipase A(1) 
Protein accessionYP_944775 
Protein GI119947095 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2829] Outer membrane phospholipase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000293811 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATCTAT TATTTTTAGT TTTTGTTTTG TTATTTAGCG CGGCCACACG GGCAGAAGAA 
TCTGCCGTTG ATCAGCGTAT CGAGCAGGAG AACAAACTCC AGAAGGACCG CTTTTCTATT
ATCCCCTATA AACCCAATTA CCTTTTGCCT TTTACTTTTA ATAATAATAT TCAATCTTAC
GATGCTGATA AGGGTGTTGC CGCATCGGAC CGATTACAAC CCGTTGAGAT AAAATTTCAA
CTTAGTTTTA AAACACCTGT CTTAGTGGAT ATTGCCGACT TACCCCTCAC GCTTTATTTT
GGTTATACCC AAGTCTCTTT CTGGCAGGCT TATAATAGCG GTAATTCATC CCCGTTTCGC
GAAACTAATT ATGAACCGGA GATGTTTCTA CGGTGGGTAC ATGACACAAA ACTAGGAGGA
GATTGGCATT TTAAATTAGC AACACTGAAC TTAGCCCATC AATCCAATGG GAAAACAGAG
CCGGGATCCC GCAGCTGGAA TCGTATCGAA AGCAATATTG TCTTGGAAAA TGGGAATATC
ACTCTGGCGT TTAATCCCTG GTTTCGTTTA CCAGAAGATG CAAAAAATGA TAATAATCCA
GATTTATTGG ATTATTATGG CCACGGAAAA ATTTATGCTC TTTATCAAAT AAATAAGCAT
AACTTTTCAA TTACCAGCCG CAATAATATT GAAAGTGGCT TTAGCAAAGG GTCACTGGAG
CTCAATTGGA GTGTCCCTCT TCACGGTAGT ATTCGCGGTT ATTTTCAGGT TTTCTCAGGC
TATGGCAACA GCCTGATAGA GTATAATCAA TATACCAATA CAGTAGGGTT AGGTATCTCA
TTAACCGACT GGTTATAG
 
Protein sequence
MYLLFLVFVL LFSAATRAEE SAVDQRIEQE NKLQKDRFSI IPYKPNYLLP FTFNNNIQSY 
DADKGVAASD RLQPVEIKFQ LSFKTPVLVD IADLPLTLYF GYTQVSFWQA YNSGNSSPFR
ETNYEPEMFL RWVHDTKLGG DWHFKLATLN LAHQSNGKTE PGSRSWNRIE SNIVLENGNI
TLAFNPWFRL PEDAKNDNNP DLLDYYGHGK IYALYQINKH NFSITSRNNI ESGFSKGSLE
LNWSVPLHGS IRGYFQVFSG YGNSLIEYNQ YTNTVGLGIS LTDWL