Gene Ping_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3492 
Symbol 
ID4625526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4321316 
End bp4323388 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content45% 
IMG OID639798608 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_944774 
Protein GI119947094 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000503881 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAG ATAAAATGCC CTTAACGGCG CTTAAAGGGG TCGGCATTAA AGCCTCGCAA 
AGGCTGGCTA AGATTGGTCT GCACAGTGTT GCTGATTTGC TCTTTCATCT GCCTTTGCAT
TATCAAGATA GAACCCGAAT TTATGCCATC GCAGATTTAA AAGACAGTAT GCAGGTCAGT
GTGCAGGGCA AAGTATTAAG CTGCGATCTA CAGTCCGGCA AGAGACGCAT TCTAAAATGT
AAAATAAGCG ACGGCAGTGG TAGCGTAACC CTTAACTTCT TCCATTTTAA TACAGCACAG
CAAAATAGCT TTGTAAAAGG GGCATTAATC AAATGTTTTG GTGAGTTTCG TCGCGGTTAC
CACGGGTTTG AAGTTACTCA TCCCGATTAC CGCCTGCTTA ATGCAATGCA GCAAAGCCAT
GTTGAGGAGA CGTTAACGCC GATCTACCCG TCAACAGAAG GTTTAAAACA AAACAGTCTG
CGTAGTTTAA CCGAGCAAGC GTTACTTCAC CTAGAGCAAC ATCAGATTGA TGAATTATTG
CCAACTCATC TGCTGGCTCA CCCGATCAGT TTATCAGATG CACTTTTTTA TATACATCGC
CCGCCACCCG ATGCCAGCAT CGAACAATTA GAAAACAAAA CCCACCCTGC GCAGCAACGT
TTAATTATTG AAGAATTATC AGCACAACAA ATCAGTATGC TGTCTTTACG GGTAAATGCA
CAGCAACATC AAGCCATTGC GGTCAAAGAA AGCGGTTTAC TGCAGGATAG GTTATTACAA
AGTCTGCCTT TTTCTCTCAC TAATGCACAA CATAGAGTGA ACTGGGAGAT TCAACAGGAT
CTAAAGCAAA CAATACCGAT GATGCGTTTG GTGCAGGGGG ATGTCGGATC CGGGAAAACC
TTAGTGGCAG CGATCGCGGC ATTAAGTGTT ATTGAGGCAG GTTATCAGGT GGCATTAATG
GCCCCCACTG AACTTTTAGC AGAGCAGCAT CTGCTTAATT TTCAAAAATG GTTTGCCGCA
CTTGATGTGT CTGTCGGTAT GCTTTCTGGA AAAATGCGCG TCAAAGAAAA GCGTTCTCAG
TTAGAAAATA TCAGCTTGGG TTTATCGAAG ATGGTGGTAG GGACGCATGC GCTGTTTCAG
GAAAGTGTCC AGTTTAATAA TTTGGCTCTT ATTATTGTGG ACGAGCAGCA TCGCTTTGGC
GTACACCAGC GTTTAGCATT ACGTGAAAAA GGGCGCTCAG GTGATTTTGC TCCGCATCAG
TTAACCATGA CGGCAACCCC TATACCAAGA ACGCTGGCGA TGACAGCTTA TGCGGATCTT
AATGTCTCGG TCATTGATGA ACTGCCACCG GGAAGAACGG CCATTAAAAC CGTTGCACTG
GTTGATAAGC GTCGTGACGA GGTTATTCAG CGGGTTTACC AGGCATGTAA AAATGAGGGG
CGGCAGGCCT ATTGGGTATG CACTTTGATT GAAGAATCGG AAGTATTGGA ATGCCAGACA
GCAGAAAATA CCGCTAATGA GATGCAGTTG GCGCTTCCAG ATCTTCGTAT CGGCCTTGTT
CACGGACGTA TGAAGGCTAA CGAAAAGCAG TCTGTTATGG ACGCTTTTAA AGAGGGGCAG
CTGGATTTAT TAGTTGCAAC AACAGTCATT GAGGTGGGTG TGGATGTGCC TAATGCCAGC
CTGATGATTA TTGAAAATCC GGAACGACTT GGACTGGCGC AATTGCACCA GTTGCGTGGT
CGAGTAGGAC GAGGTGAAGT GGCCAGCCAT TGTGTTTTGC TATATAAAAA TCCACTGTCG
AAAACCGCCC AAAGACGTTT GCAGGTGTTG CGTGAAAGCA ATGATGGTTT TTATATTGCC
GAACAGGATC TGGCTATTCG CGGTCCTGGT GAAGTGTTAG GCACCAGACA GACGGGCGTT
GCTGAATTTA AAATAGCTGA TTTGCTGCGC GATCAAAGTT TATTACCGCA AGCGCAGCAA
TTGGCCTTTC AGCTGATGCA TTCTTTCCCT GAGTTAATTC CAGAACTTAT CCAGCGTTGG
TTAGGGGATA AGGATCGTTA TGTTCATGCC TAG
 
Protein sequence
MKLDKMPLTA LKGVGIKASQ RLAKIGLHSV ADLLFHLPLH YQDRTRIYAI ADLKDSMQVS 
VQGKVLSCDL QSGKRRILKC KISDGSGSVT LNFFHFNTAQ QNSFVKGALI KCFGEFRRGY
HGFEVTHPDY RLLNAMQQSH VEETLTPIYP STEGLKQNSL RSLTEQALLH LEQHQIDELL
PTHLLAHPIS LSDALFYIHR PPPDASIEQL ENKTHPAQQR LIIEELSAQQ ISMLSLRVNA
QQHQAIAVKE SGLLQDRLLQ SLPFSLTNAQ HRVNWEIQQD LKQTIPMMRL VQGDVGSGKT
LVAAIAALSV IEAGYQVALM APTELLAEQH LLNFQKWFAA LDVSVGMLSG KMRVKEKRSQ
LENISLGLSK MVVGTHALFQ ESVQFNNLAL IIVDEQHRFG VHQRLALREK GRSGDFAPHQ
LTMTATPIPR TLAMTAYADL NVSVIDELPP GRTAIKTVAL VDKRRDEVIQ RVYQACKNEG
RQAYWVCTLI EESEVLECQT AENTANEMQL ALPDLRIGLV HGRMKANEKQ SVMDAFKEGQ
LDLLVATTVI EVGVDVPNAS LMIIENPERL GLAQLHQLRG RVGRGEVASH CVLLYKNPLS
KTAQRRLQVL RESNDGFYIA EQDLAIRGPG EVLGTRQTGV AEFKIADLLR DQSLLPQAQQ
LAFQLMHSFP ELIPELIQRW LGDKDRYVHA