Gene Ping_3491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3491 
Symbol 
ID4625525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4319945 
End bp4321243 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content39% 
IMG OID639798607 
Producthypothetical protein 
Protein accessionYP_944773 
Protein GI119947093 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.350952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000435394 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGTT GTTTTGTCAC TGGCGCTTTT ATACTGGGTT TATTAGGTTT TTTATTACTC 
CTTTTTATCC GTTTTTTTGA TATCAATGCG CATCGGGGGT TTATCAGCAA ACAGATAGAA
CAGTTAAGCG GCTATCAGGT TAATTTTGAG TCAGTTGATA GTCACCTATT TTCTGATTAC
TCAGTTTCAC TTTCTGGCCT GTCTTTGACA ATCGCTAACC GGCAAGTATT TTATGTCGAT
AAAGTGAAGG TTAACCTCAC TAAGCTTAAT CTCTGGCAAA GGCAGTTAAA ACTTGGCGAA
GTACAATTAA CCGGAGTGCG CATTTCAGGT GATACTGCTG CTTTTATTAA TACTGCCGAT
GTTAAAATTG TGGAGAATAG CAACAGTGTT CAGCAAACGG CGGAGGTACA AATCCAGAAA
AAACTAGCCT GGCAGCGGCT GACTATCAGC AGATTTTCGG TTAACGATTT AAAGATAGAA
TTTACTCACG CAGGGCAAAG AGTGGTGCTT GATGGTGCTG ATTTTACGTC AGATAATCTG
CAGATTATAG CCGATCACAA GCTCGTAAAA ATGCCTTTTT CTGGTAACTT AAAGCTGCTG
GCAAGAGAGT TTACTGCACA GCCTACAGCC AGTAAAACAC TTACTGTTAA AAATCTTCAA
TTGACTGCGT CTTTTAATTT AAAAAATTTA CAAGCGAATC TCAGTTTTAA AGCAGGGTCA
CTCAATCTCG CTTTCGGGCC GGAGGAGGTT GCACTGCAAA ATACAGAGCT TGTCGCTGAG
CTTAATAATA ATAAAGCCAG CATAACAAAG TTAACCAGCC AAATATTCTC CGGGCAGTTA
CAACTTCAAG CAGAGGCCTT ATTTTTAATA AAGCCGTTAT CTTCACCTTT TCTATCAGTT
CAACAGTTAA CGGTGCAAAA GTTGGCCATT AAAAATATGA ATGTCGTTAT CCCCGCTGTG
TTTAAGGATT CTGGCGCGGT TAAAAAAAAT AAACTGCTAT TTCCGATTAC CAACCTTCTA
TTAAAGGAGC TTATTGTCAA AAATGTCAAT ATCCGCAGTG ATAATTCGAC AATTCCTTTA
GTGATAAATA ATTTAAATGC AGCAGTGACC GATTTCGTTT TACTACAGAA TAAACAGCTG
CAAGGTTTAG CTGAAGAAAA AAAACAAGCC GGATCCTTTG CTGTGCAGTT TGATTATTTA
CGGTGGATGG AAAGCAATAT TGAGCAGTTT GAAATTTCAG GCAAACTGTC GCAAGATGAT
GACGGTGCTT TGCTGATAAA AAAACTATTA GCGGAATAA
 
Protein sequence
MKRCFVTGAF ILGLLGFLLL LFIRFFDINA HRGFISKQIE QLSGYQVNFE SVDSHLFSDY 
SVSLSGLSLT IANRQVFYVD KVKVNLTKLN LWQRQLKLGE VQLTGVRISG DTAAFINTAD
VKIVENSNSV QQTAEVQIQK KLAWQRLTIS RFSVNDLKIE FTHAGQRVVL DGADFTSDNL
QIIADHKLVK MPFSGNLKLL AREFTAQPTA SKTLTVKNLQ LTASFNLKNL QANLSFKAGS
LNLAFGPEEV ALQNTELVAE LNNNKASITK LTSQIFSGQL QLQAEALFLI KPLSSPFLSV
QQLTVQKLAI KNMNVVIPAV FKDSGAVKKN KLLFPITNLL LKELIVKNVN IRSDNSTIPL
VINNLNAAVT DFVLLQNKQL QGLAEEKKQA GSFAVQFDYL RWMESNIEQF EISGKLSQDD
DGALLIKKLL AE