Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3487 |
Symbol | |
ID | 4625521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4315368 |
End bp | 4316438 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639798603 |
Product | sensor histidine kinase |
Protein accession | YP_944769 |
Protein GI | 119947089 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0596493 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAATA ATCATTCAAA CTCACTTGCA GTTGCCATAC TTGAAGAAGC GAATACTGCC TTTGTTATTA TTAACGCAAA ATTAAAACTG ATCTATGCAA ATCCAGCGAG TGAGGTTTTA TTGTCACAAA GCAAACAACG TCTTTACCAG CAAAGTTTGC AGCAACTGGC AAATCATTAT CACTTTGATC CCACCTATAT TGAAGCTGTT TTTACCAAAC AAAATGCGTT CACTGACAGT GAAACGACCT TAATGGTTGA TGGTCATCCT CTTTTAATGG CATTAAGTGC CACCTATTTA GAGTTTGAAA ATCAGAATTA TGTGATCATT GAGATGCACT GTATTGGACA GCAGCGTAAA ATAAGCCAAT TTCATTATCA AGATCATCAA CAAAAAGTCG CAAAAGAACT TGTTCGCGGA CTTGCTCATG AAATAAAAAA TCCACTCGGA GGCCTACGCG GTGCGGCACA ATTATTAGAA AGTGAACTGG CAGATCCTGA ACTTAAAGAG TTTACCCAAA TAATTATTGA ACAAGCGGAT CGTCTAAGCG CATTAGTTAA TCGTTTATTA GGCCCGCAAA CCTTGGGAGA GCGCTCCTAT CATAATTTAC ATTCTGTGCT TGAAAAAGTG CGGAAATTAG TCTGTTTGGG GCTTCCTGAG CATATCCACA TCAAAATTGA TTATGATCCG AGCATTCCAG ATTTTGAAAT GCAGCCGGAT CAACTGCAGC AAGCATTCTT AAATATTCTT CAAAATGCAG TGCAATCACT GAGTACTCAG CCGGAGAAAA ACTTAGAAAT AATTATCAAA ACGCGTACTG CCCACCAAGT TATTATTCAT GGTGTATTAC AACGCTTAGC GGCTGAAATT TCAATTATTG ATAATGGCCC AGGTGTCCCT GAGCATTTAA AAGATACCTT ATTTTACCCT ATGGTAACGG GTCGCTGTGA TGGTACGGGA TTGGGGCTAT CTATTGCTCA GGAGCTTATT AACCAAGAGA GAGGACGTAT CGAATGCGAC AGTATGGAAG GTCATACTGA GTTTCTTATC TATCTGCCTT TAACAATTTA A
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Protein sequence | MLNNHSNSLA VAILEEANTA FVIINAKLKL IYANPASEVL LSQSKQRLYQ QSLQQLANHY HFDPTYIEAV FTKQNAFTDS ETTLMVDGHP LLMALSATYL EFENQNYVII EMHCIGQQRK ISQFHYQDHQ QKVAKELVRG LAHEIKNPLG GLRGAAQLLE SELADPELKE FTQIIIEQAD RLSALVNRLL GPQTLGERSY HNLHSVLEKV RKLVCLGLPE HIHIKIDYDP SIPDFEMQPD QLQQAFLNIL QNAVQSLSTQ PEKNLEIIIK TRTAHQVIIH GVLQRLAAEI SIIDNGPGVP EHLKDTLFYP MVTGRCDGTG LGLSIAQELI NQERGRIECD SMEGHTEFLI YLPLTI
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