Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3482 |
Symbol | rbn |
ID | 4625555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4307439 |
End bp | 4308317 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798598 |
Product | ribonuclease BN |
Protein accession | YP_944764 |
Protein GI | 119947084 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.384798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG GTAGAAAAAT TGTGATGGAC AAAGTTAAAG TTACCTACCA ATACTTGCTC TTTGTATGGC GGCGGAGTGA ACAGGATAAT ATTAAGGTGC CGGCGGGGCA TCTGGCCTAT GTGACTTTAT TATCTATCGT GCCCTTACTG GCCGTTATTT TCTATATGTT AGCGGCTTTT CCAGTTTTTT CTGATCTGAA GGGAATGTTA GAAGATCTTA TTTATAACAA TCTGCTGCCC ACATCTGGAG ATACGATTCA GGAGCATATC AGCGGCTTTA TTGAAAATAC TAAAAAAATG AGCATGATGG GGATTGGCTC ATTGATAGCG ATTGCATTAT TATTGATATC TACGATAGAT CAAACCATTA ACCGCATCTG GCGTTGCACT AATAAACGTT CCCGAATCCA GTCCTTTACT ATTTATTGGA CTATTTTAAG CTTGGGTCCG GTGATTATCG GCGCGAGTCT GGCATTAAGC TCTTACCTTT TTAGTGTTTT TCAAGAACAT GGCTCTCTGT CATTTGGCCA ACGACTATTG AGCTTAATGC CTTTTATTTT AACCTGGTTA ACCTTTGCCG GTGTTTATAC GCTTGTGCCT CATCAGCGAG TCAGTTTTCG TTATGCATTA ATAGGTGGTT TGATTGCGGC TATTCTGTTT TTCTTCGGCA CCGATCTTTT CCGCTTATAT ATTACTAATT TCCCCTCGCA GCAGATAATA TACGGTGCGC TGGCAGTGAT CCCAATTCTC TTTGTGTGGA TCTATTACAG TTGGTTAATT GTTTTAATCG GTGCTGAAGT CACTGCGACA TTAGAAGAGT TTTTAAAGCA GCAGGAAGAC AACAATGTGA CTAAAGAATA TTTGGGAGCG GACATATGA
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Protein sequence | MKFGRKIVMD KVKVTYQYLL FVWRRSEQDN IKVPAGHLAY VTLLSIVPLL AVIFYMLAAF PVFSDLKGML EDLIYNNLLP TSGDTIQEHI SGFIENTKKM SMMGIGSLIA IALLLISTID QTINRIWRCT NKRSRIQSFT IYWTILSLGP VIIGASLALS SYLFSVFQEH GSLSFGQRLL SLMPFILTWL TFAGVYTLVP HQRVSFRYAL IGGLIAAILF FFGTDLFRLY ITNFPSQQII YGALAVIPIL FVWIYYSWLI VLIGAEVTAT LEEFLKQQED NNVTKEYLGA DI
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