Gene Ping_3481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3481 
Symbol 
ID4625554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4307005 
End bp4307442 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID639798597 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_944763 
Protein GI119947083 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.354164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCCC TTATACAGCG TGTTAGTGAC GCCAGAGTTA CCGTTGCCGG AGAAAATATT 
GGTCAAATAG GGCCTGGGTT ACTGGTTTTA TTAGGCGTTG AAAAAGAGGA TGATGAAGCT
AAATGCAAAC GTCTGGCACA ACGGGTACTC GCTTATCGAA TATTTGCCGA CGGCGACGAT
AAAATGAATC TTAATGTGCA GCAAGCAGGA GGGAAAATTT TAGTTATTTC ACAATTTACT
CTGGCGGCAC AAACGAATAA GGGCAATCGT CCAGGTTTTT CAAAGGGCGC GGAGCCGATC
GAGGCCAAAC GCCTTTACAA ACTGTTTAAT AAAAACTGTT CAGAGATGGG TATTAAGGTT
GAAACGGGAG AGTTTGCTGC TGATATGCAG GTCAGTTCAA CTAACGATGG CCCAGTAACC
TTTTGGCTGC AGATTTAG
 
Protein sequence
MIALIQRVSD ARVTVAGENI GQIGPGLLVL LGVEKEDDEA KCKRLAQRVL AYRIFADGDD 
KMNLNVQQAG GKILVISQFT LAAQTNKGNR PGFSKGAEPI EAKRLYKLFN KNCSEMGIKV
ETGEFAADMQ VSSTNDGPVT FWLQI