Gene Ping_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3477 
Symbol 
ID4625550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4301304 
End bp4302326 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content46% 
IMG OID639798593 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_944759 
Protein GI119947079 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.350304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TTATTACGGG TGGAATGGGT TATATCGGGA GCCATACTTG TATTCAACTG 
ATGGCTGCGG GCATGACACC CATTATTCTG GACAATTTAT CCAACAGCAG TGAAATCGTA
TTATCAAGAA TCCATCATTT AACTGGCGCT ACACCGGTTT TTTATCAGGG TGATGTGCGC
GATCGTCATA TTTTAGAAAA AATATTTGCA GAGCATGAAA TTGCCGCTGT GATTCACTTT
GCCGGTTTAA AATCCGTTGG CGAATCCGTT GCAAAGCCCC TGGAATATTA TGATAACAAT
GTGCACGGCT CCCTACTGCT CGCAGAAGTT ATGAAAAATG CAGGGGTAAA AAGCCTGTTA
TTCAGCTCAT CGGCCACGGT CTACGGCTCC CCGCTGAAAA TGCCTATTAC TGAATCGACA
CCAACGGGTG CAACCACTAA TCCCTATGGT CGCAGTAAAT ATATTGTTGA AGAGTGTTTG
CGGGATTTAC AAGCGGCACA GCCGGAATTA AGTATCACAT TATTACGTTA TTTCAATCCC
GTTGGCGCCC ATATTTCCGG TACTATCGGC GAGGATCCAC AGGGTATTCC GAATAATCTA
ATGCCTTTTA TTGCTCAGGT TGCGGTAGGA AGACGCGAAA AATTATCTGT ATTTGGTAAT
GATTATAATA CCCCCGACGG TACCGGTGTA CGTGATTATA TCCATGTAAT GGACTTGGCC
GACGGACATG TTGCCGCCCT TAAAGCGGTC GGACTTAAAC CCGGTCTGCA TATCTATAAT
CTGGGTACAG GCCAAGGCAG CAGTGTATTA GAGATGGTTG ATGCCTTTGC TAAAGCGAGT
GGCAAAGAAG TTCCTTATAC TGTCTGTGCG CGTCGACCGG GTGACATTGC CGAATGCTGG
GCAGATACTT CCAAAGCCAA CCGCGAGCTA AACTGGAAAG CGAGCCGAAC ATTAAAAGAG
ATGTCCGAGG ACAGTTGGCG TTGGCAGTCA CAAAACCCTA AGGGTTATGG CAGTCAAGAA
TAG
 
Protein sequence
MKILITGGMG YIGSHTCIQL MAAGMTPIIL DNLSNSSEIV LSRIHHLTGA TPVFYQGDVR 
DRHILEKIFA EHEIAAVIHF AGLKSVGESV AKPLEYYDNN VHGSLLLAEV MKNAGVKSLL
FSSSATVYGS PLKMPITEST PTGATTNPYG RSKYIVEECL RDLQAAQPEL SITLLRYFNP
VGAHISGTIG EDPQGIPNNL MPFIAQVAVG RREKLSVFGN DYNTPDGTGV RDYIHVMDLA
DGHVAALKAV GLKPGLHIYN LGTGQGSSVL EMVDAFAKAS GKEVPYTVCA RRPGDIAECW
ADTSKANREL NWKASRTLKE MSEDSWRWQS QNPKGYGSQE