| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3475 |
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| Symbol | |
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| ID | 4625548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4296481 |
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| End bp | 4297602 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639798591 |
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| Product | secretion protein HlyD-like protein |
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| Protein accession | YP_944757 |
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| Protein GI | 119947077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.555415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT GGATCGCATC AGCCATCATC TTAGCCCTGC TTGTTTTCGG CTCCGTGATT
GGCTTTAATA TGTTTAAAGC CATGAAAACT AAAGAGTATC TGGCTAACCG TCCGATTCCG
GAATTTCCAG TTACCAGCAC CACGGTTACA TTGGAAGACT GGACTCCACA TCTGCGCGCC
ATTGGTTTTA TTGAGCCTAT TCAAGGGGTT AATATTGCTA ATGAAGTGAC AGGTAAAGTG
GTTAAGATAG AATTTGAGTC TGGTCAGAAA CTGCAAGCGA ATGACCCCCT TGTATACCTT
GATTCGGCAG TTGAAGAGGC TAATTTAAGA GCCGCTCAAG GGCGCCTATC AGCCGTTCAG
CGTAATTATA CGCGGGTTAA CTCGTTATTT TCCAAAGGAT CGGTTTCCCA GGGACAGGTC
GATGATGCAG AAGCTGACCT ATTAGCCCTA CAGGGACAAA TAGAAAGTTA TCAGGCAACC
ATTAGCCGCC GTATTATTCG TGCCCCCTTT GATGGTATTA CCGGCCTGCG TAATGTATTT
ATTGGTGATT ATTTAAGTGC GGGTACCGAT CTAGTGCGTT TAGAAGATGT CAGTAAAATG
CGCCTCCGTT TTACTGTGCC GCAAAATGAT CTGAATAAAA TTTATATCGG TCAGCCCATG
GATATTTTTG TTGATGCTGA GCCGGAAATT GCTTTTACCG GTACCATTTC TGCTATCGAA
CCTGCGGTAA ACTATCAAAG CGGCCTGATT CAAGTGCAGG CAGAGATACC CAATACGGCG
CAACAATTAC GCTCGGGTAT GTTTGCCAAG GCCAATATTA TTTTACCTAC CGTGCCAAAA
CAAATTGTTA TTCCGGAAAC CGCTATTAAT TATACCCTTT ACGGTAAAAC CGTTTATCTG
ATCACCGAGC AGCAGGATAA ATCGGGTAAA AGCTTTTTGC AGGCAGACCA ACGCATAGTC
AAACTCGGTA AAAGTAAAGA TGGTTCAATC CGTATACTCG ATGGTATTAA AAAGGGTGAT
CTAGTAGTAA CAAGTGGCCA GGTACGATTA AGTAATACGG CACGTGTGAC TATCATAGAA
TCAGACATTT TAAATATACC TGCTGAAATT CCGGCACTAT AG
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| Protein sequence | MKKWIASAII LALLVFGSVI GFNMFKAMKT KEYLANRPIP EFPVTSTTVT LEDWTPHLRA
IGFIEPIQGV NIANEVTGKV VKIEFESGQK LQANDPLVYL DSAVEEANLR AAQGRLSAVQ
RNYTRVNSLF SKGSVSQGQV DDAEADLLAL QGQIESYQAT ISRRIIRAPF DGITGLRNVF
IGDYLSAGTD LVRLEDVSKM RLRFTVPQND LNKIYIGQPM DIFVDAEPEI AFTGTISAIE
PAVNYQSGLI QVQAEIPNTA QQLRSGMFAK ANIILPTVPK QIVIPETAIN YTLYGKTVYL
ITEQQDKSGK SFLQADQRIV KLGKSKDGSI RILDGIKKGD LVVTSGQVRL SNTARVTIIE
SDILNIPAEI PAL
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