| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3474 |
|---|
| Symbol | |
|---|
| ID | 4625547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4295884 |
|---|
| End bp | 4296459 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639798590 |
|---|
| Product | transcriptional regulator of TetR family protein |
|---|
| Protein accession | YP_944756 |
|---|
| Protein GI | 119947076 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.486624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA AACGCAAAAA AATCTTAAAC GCTGCTGAAA TTTTACTGGC TGAACGCGGT
TTCTACGGAC TTTCGATGAA AGCGCTGGCG GATTCTGCCG GTGTTGCGGC GGGCACTATC
TATCGTTATT TTGAAAATAA AGAGGATATG ATTAATCAGC TGCATCAACA TGTTAAAGAA
GAGATCGCGG CCGTTAGCTT CAAAGGGCTG CATAAAGGGC TCAGTGAAAA AGAAAAATAT
GCATTGTGCT GGCGTAATAC TTATCAGTCG GTATTAACCA ACCCGAACCG CTTAATTGCC
GTGTCTATGT TATTTCTTAG ACCCTGTGTA AAAGGGCAAG AGATGCTCTC CTGTAACGAT
GCTCTCTTTG CTCCGCTATT TAATATTTAT GAGCAGGGTA TTCGTGAGCA TATATTCCAT
GACTTCCCTG TGCAGGCTTT AATTTCATTA AGCTTTGAAT CGTCCATTAA TCTGGCAAAA
AAAGTGATGA ATCACAGTAT TGATCAACCT GACGAACAAC TTATTACGCA AATAATAGAC
GCCTCCTGGC AGGCAATTTT AAAACCCACA ACTTAA
|
|---|
| Protein sequence | MSDKRKKILN AAEILLAERG FYGLSMKALA DSAGVAAGTI YRYFENKEDM INQLHQHVKE
EIAAVSFKGL HKGLSEKEKY ALCWRNTYQS VLTNPNRLIA VSMLFLRPCV KGQEMLSCND
ALFAPLFNIY EQGIREHIFH DFPVQALISL SFESSINLAK KVMNHSIDQP DEQLITQIID
ASWQAILKPT T
|
|---|
| |