Gene Ping_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3474 
Symbol 
ID4625547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4295884 
End bp4296459 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content41% 
IMG OID639798590 
Producttranscriptional regulator of TetR family protein 
Protein accessionYP_944756 
Protein GI119947076 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.486624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AACGCAAAAA AATCTTAAAC GCTGCTGAAA TTTTACTGGC TGAACGCGGT 
TTCTACGGAC TTTCGATGAA AGCGCTGGCG GATTCTGCCG GTGTTGCGGC GGGCACTATC
TATCGTTATT TTGAAAATAA AGAGGATATG ATTAATCAGC TGCATCAACA TGTTAAAGAA
GAGATCGCGG CCGTTAGCTT CAAAGGGCTG CATAAAGGGC TCAGTGAAAA AGAAAAATAT
GCATTGTGCT GGCGTAATAC TTATCAGTCG GTATTAACCA ACCCGAACCG CTTAATTGCC
GTGTCTATGT TATTTCTTAG ACCCTGTGTA AAAGGGCAAG AGATGCTCTC CTGTAACGAT
GCTCTCTTTG CTCCGCTATT TAATATTTAT GAGCAGGGTA TTCGTGAGCA TATATTCCAT
GACTTCCCTG TGCAGGCTTT AATTTCATTA AGCTTTGAAT CGTCCATTAA TCTGGCAAAA
AAAGTGATGA ATCACAGTAT TGATCAACCT GACGAACAAC TTATTACGCA AATAATAGAC
GCCTCCTGGC AGGCAATTTT AAAACCCACA ACTTAA
 
Protein sequence
MSDKRKKILN AAEILLAERG FYGLSMKALA DSAGVAAGTI YRYFENKEDM INQLHQHVKE 
EIAAVSFKGL HKGLSEKEKY ALCWRNTYQS VLTNPNRLIA VSMLFLRPCV KGQEMLSCND
ALFAPLFNIY EQGIREHIFH DFPVQALISL SFESSINLAK KVMNHSIDQP DEQLITQIID
ASWQAILKPT T