| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3469 |
|---|
| Symbol | |
|---|
| ID | 4625542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4289412 |
|---|
| End bp | 4290275 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639798585 |
|---|
| Product | 4-hydroxybenzoate polyprenyl transferase |
|---|
| Protein accession | YP_944751 |
|---|
| Protein GI | 119947071 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.689102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.729322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TTTGCAAAGA AAAACGCCAG GCCTACGTAG AATTAATGCG TATTAACAAA
CCCATTGGCA CCCTTTTATT ACTCTGGCCA ACCCTCTGGG CATTGTGGAT AGCCGCTCAG
GGATTTCCTG ATCTGGGTGT GTTAATCGTA TTTTCAGCTG GTGTTTTTTT AATGCGCAGC
GCAGGGTGTG TGATTAATGA TTTTGCAGAT CGTAACATTG ATGGTTTTGT CGAGCGTACC
AAACACCGCC CATTACCCTC CGGTCGCGCC ACCAGCACAG AAGCGATTAT TCTTTTTTTC
ATACTTGCCA TCGTTTCTTT CTTATTGGTG CTGACCCAAA ACAGTTTAAC CATTCAGTTG
TCCTTTGCGG GTTTACTACT GGCCTTTGCC TACCCTTTTA TGAAGCGTTT TACGCAGTTA
CCGCAACTTG TATTAGGTCT CGCTTTTAGT TGGTCTATCC CCATGGCATT TGCGGCACAG
GCGAACGCAT TACCTGCTGT GGTTTGGATT ATCTTTGCGG TTAATATTAT TTGGACTATC
GCTTACGATA CCCTTTATGC CATGGTGGAC AGGGAAGATG ATCTTAAAAT AGGCGTGAAA
TCCACTGCTA TTTTATTTGC CAGCAATGAC AAGATAATTA TTGCTTTATT ACAACTGACT
AGCCTGATTT TATTAAGCCT ATTAGGCTGG TTGGAAGATT TAAATTGGAT CTACTTTATT
GCCCTGCTGG TAGTTGGCGG TTTATTTTTA AGGCAACAAC TGCAGATAAA AAACCGCGAA
AAAACTGCTT GTTTTAAAGC TTTTCTAGAC AATAATTATG TTGGATTCGT TATTTTTGCT
GGCTTGTTTT TGGGTTATTT ATAG
|
|---|
| Protein sequence | MNFFCKEKRQ AYVELMRINK PIGTLLLLWP TLWALWIAAQ GFPDLGVLIV FSAGVFLMRS
AGCVINDFAD RNIDGFVERT KHRPLPSGRA TSTEAIILFF ILAIVSFLLV LTQNSLTIQL
SFAGLLLAFA YPFMKRFTQL PQLVLGLAFS WSIPMAFAAQ ANALPAVVWI IFAVNIIWTI
AYDTLYAMVD REDDLKIGVK STAILFASND KIIIALLQLT SLILLSLLGW LEDLNWIYFI
ALLVVGGLFL RQQLQIKNRE KTACFKAFLD NNYVGFVIFA GLFLGYL
|
|---|
| |