Gene Ping_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3467 
Symbol 
ID4625540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4287722 
End bp4288564 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content39% 
IMG OID639798583 
Productmembrane serine peptidase 
Protein accessionYP_944749 
Protein GI119947069 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.97939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAC TGCATCAATT TCAAAACGAA CGTGCTGCAC AAGCATTTTC TGATTATTTA 
AGTGCTATTG GTATTAAAAA CAACCTTCAT CATGACGACT TTAGCTATCA ATTATTGATT
GAACAAAAAG AGCAGCAGAC GCAGGCTGAA ATTGAGCTGG ATCTGTTTTT ACAGCATCCC
AATGATCCTA AATATATGTC GGCAAGCTGG CAAACCGGTG AGGTAAGCAG TGAAAATAAC
TATTTCGCTT TTGCTGACTC GAATTTAGTC AGCAATTTTA TCCATCATGC GGGGTTAGTG
ACTCATAGTA TTTTTGCTGT CTGTTTAGTT ATTTACCTGC TGATAGCATC TGGGGTGTTT
CAACCAATCC CTTCTGTATT GTCTTTTTTT AGTCAGCAAC CCTTTGATTA TTTACAGAGT
TGGCGTTTTA TTACCCCAGC GTTATTACAT TTCAGCGCAC TGCACATTAT TTTTAATTTA
CTGTGGTGGT GGCAATTAGC CGGTCTTGTT GAAAAACAGC AGGGTAAAAT GCACTTGCTG
GTGCTTTTCC TGTTTTCAGG AATCGCTGCT AATCTGGCGC AATATTTTTT AGTCAGCCCT
TATTTTGGCG GATTAAGCGG TGTTGTTTAT GGGTTAGTGG GTTATTGCTG GTTATTTGGC
AAGCTCAATA AAAGCAGTCA AGTAATGTTG CCCGATGCTT ATTTTGTCTT TTTACTCGCC
TGGCTGGTTT TAGGTTTTGT GGATCTGTTA CCGGTAAATA TTGCTAACTA TGCGCATCTG
GTGGGGTTAT TAGCGGGTTT ATTAATGGCG GTTCTGACCA GTAAACTAAG GTTACATGTT
TAA
 
Protein sequence
MFLLHQFQNE RAAQAFSDYL SAIGIKNNLH HDDFSYQLLI EQKEQQTQAE IELDLFLQHP 
NDPKYMSASW QTGEVSSENN YFAFADSNLV SNFIHHAGLV THSIFAVCLV IYLLIASGVF
QPIPSVLSFF SQQPFDYLQS WRFITPALLH FSALHIIFNL LWWWQLAGLV EKQQGKMHLL
VLFLFSGIAA NLAQYFLVSP YFGGLSGVVY GLVGYCWLFG KLNKSSQVML PDAYFVFLLA
WLVLGFVDLL PVNIANYAHL VGLLAGLLMA VLTSKLRLHV