Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3467 |
Symbol | |
ID | 4625540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4287722 |
End bp | 4288564 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639798583 |
Product | membrane serine peptidase |
Protein accession | YP_944749 |
Protein GI | 119947069 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.97939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTAC TGCATCAATT TCAAAACGAA CGTGCTGCAC AAGCATTTTC TGATTATTTA AGTGCTATTG GTATTAAAAA CAACCTTCAT CATGACGACT TTAGCTATCA ATTATTGATT GAACAAAAAG AGCAGCAGAC GCAGGCTGAA ATTGAGCTGG ATCTGTTTTT ACAGCATCCC AATGATCCTA AATATATGTC GGCAAGCTGG CAAACCGGTG AGGTAAGCAG TGAAAATAAC TATTTCGCTT TTGCTGACTC GAATTTAGTC AGCAATTTTA TCCATCATGC GGGGTTAGTG ACTCATAGTA TTTTTGCTGT CTGTTTAGTT ATTTACCTGC TGATAGCATC TGGGGTGTTT CAACCAATCC CTTCTGTATT GTCTTTTTTT AGTCAGCAAC CCTTTGATTA TTTACAGAGT TGGCGTTTTA TTACCCCAGC GTTATTACAT TTCAGCGCAC TGCACATTAT TTTTAATTTA CTGTGGTGGT GGCAATTAGC CGGTCTTGTT GAAAAACAGC AGGGTAAAAT GCACTTGCTG GTGCTTTTCC TGTTTTCAGG AATCGCTGCT AATCTGGCGC AATATTTTTT AGTCAGCCCT TATTTTGGCG GATTAAGCGG TGTTGTTTAT GGGTTAGTGG GTTATTGCTG GTTATTTGGC AAGCTCAATA AAAGCAGTCA AGTAATGTTG CCCGATGCTT ATTTTGTCTT TTTACTCGCC TGGCTGGTTT TAGGTTTTGT GGATCTGTTA CCGGTAAATA TTGCTAACTA TGCGCATCTG GTGGGGTTAT TAGCGGGTTT ATTAATGGCG GTTCTGACCA GTAAACTAAG GTTACATGTT TAA
|
Protein sequence | MFLLHQFQNE RAAQAFSDYL SAIGIKNNLH HDDFSYQLLI EQKEQQTQAE IELDLFLQHP NDPKYMSASW QTGEVSSENN YFAFADSNLV SNFIHHAGLV THSIFAVCLV IYLLIASGVF QPIPSVLSFF SQQPFDYLQS WRFITPALLH FSALHIIFNL LWWWQLAGLV EKQQGKMHLL VLFLFSGIAA NLAQYFLVSP YFGGLSGVVY GLVGYCWLFG KLNKSSQVML PDAYFVFLLA WLVLGFVDLL PVNIANYAHL VGLLAGLLMA VLTSKLRLHV
|
| |