Gene Ping_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3450 
Symbol 
ID4625568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4266422 
End bp4266883 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content41% 
IMG OID639798567 
Productribosomal protein L11 
Protein accessionYP_944733 
Protein GI119947053 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0033133 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0131963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTAC ACCCAAATAT AGGTAGTAAT ATTATGGCTA AAAAAGTACA AGCATATATC 
AAGCTGCAAG TTAAAGCTGG TATGGCTAAT CCGTCACCAC CAGTAGGTCC TGCTCTTGGT
CAACACGGTG TTAACATCAT GGAATTTTGT AAAGCATTTA ATGCAAAAAC AGATGCCATG
GAAAAAGGCG CTCCAACGCC AGTTGTCATT ACAGTTTATG CGGATCGTTC TTTTACGTTC
GTAACAAAAA CGCCACCTGC ATCTTTCTTA CTTAAGAAAG CAGCTGGTAT AAAATCTGGT
TCTGCAGTTC CTAATAAAGA TAAAGTGGGC AAAGTAACAC AAGTCCAACT TGAAGAAATT
GCAACAATTA AAGAATCTGA TTTAACGGGT GCCGATCATG AAGCGATGGT ACGTTGTATA
GCGGGTTCGG CCCGTTCAAT GGGTCTGGAA GTAGAGGGCT AA
 
Protein sequence
MALHPNIGSN IMAKKVQAYI KLQVKAGMAN PSPPVGPALG QHGVNIMEFC KAFNAKTDAM 
EKGAPTPVVI TVYADRSFTF VTKTPPASFL LKKAAGIKSG SAVPNKDKVG KVTQVQLEEI
ATIKESDLTG ADHEAMVRCI AGSARSMGLE VEG