| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3439 |
|---|
| Symbol | |
|---|
| ID | 4625593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 4252879 |
|---|
| End bp | 4253349 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639798556 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_944722 |
|---|
| Protein GI | 119947042 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000192356 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000249886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAA GACGCGTCGT AGGTACTCGT AAAATCCTTC CAGATCCTAA GTTCGGATCA
GAAGTTTTAG CAAAATTCGT TAACGTTGTA ATGGTTGACG GCAAAAAATC TATCGCAGAA
AAAATCGTAT ATGGTGCATT AGAAGCAGCT GCAAGTAAAA GCGGCAAAGT TGCACTGGAT
CTTTTTGAAG TAGCTCTTGA AAATATACGC CCAAGCGTCG AAGTTAAATC TCGTCGTGTT
GGTGGTTCAA CATACCAAGT TCCTGTAGAA GTTCGTCCTT CTCGTCGTAA TGCGTTAGCA
ATGCGTTGGT TAGTTGAAGC ATCACGTAAG CGTGGTGAAA AATCAATGGC ATTACGTCTA
GCTGGTGAGC TAGTTGATGC ATCTGACAAT AAAGGTTCTG CGGTTAAGAA ACGTGAAGAC
GTTCACCGTA TGGCTGACGC TAACAAAGCG TTTGCTCACT ACCGCTGGTA G
|
|---|
| Protein sequence | MPRRRVVGTR KILPDPKFGS EVLAKFVNVV MVDGKKSIAE KIVYGALEAA ASKSGKVALD
LFEVALENIR PSVEVKSRRV GGSTYQVPVE VRPSRRNALA MRWLVEASRK RGEKSMALRL
AGELVDASDN KGSAVKKRED VHRMADANKA FAHYRW
|
|---|
| |