Gene Ping_3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3436 
Symbol 
ID4625590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4248402 
End bp4249166 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content43% 
IMG OID639798553 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_944719 
Protein GI119947039 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02057] phosphoadenosine phosphosulfate reductase, thioredoxin dependent 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.366253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0011712 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAACA GATTGAATCT AACCCAGCTA CTTAGTTTAG ATAAAGCGCA ACAGACTGAA 
GCCTTACAAG AAGCCAATGA CCTGCTTGAA AATAAAACCG CCCGTGAACG CGTTGAATGG
GCGATTGAAC ACCTTGAAAG TGAATTTGTT TTATCGTCAA GTTTTGGCAT TCAGGCAGCT
GTCTGCCTGC ATTTAATTAC TCAGGTAAAA GCGGATACGC CGATTATTTT AACAGATACG
GGTTATCTGT TTCCGGAGAC CTATCGGTTT ATTGATGCGT TAACTGAAAA ATTAAATCTG
AACTTGAAAA CGTATCGTGC CGAGCACAGC AGTGCCTGGC AGGAAGCACG CTATGGTAAA
TTATGGGAGC AGGGTGTTGA TGGCTTAACT CAGTACAACT TAATCAATAA AGTTGAACCA
ATGAAACGCG CGCTTAAGGA TCTTAATGCA AAAACCTGGT TTTCGGGTTT ACGCCGCTCG
CAAGCATCCA GTCGTGGAAA ACTGCCTGTA TTAAGTATTC AAAATGGTTG TTTTAAGTTT
TTACCTATTA TTGATTGGAG TAATAAAGAC GTTCATTACT ATCTCAGCGA TCATGGTCTT
GAGTACCACC CTCTTTGGGA GCAAGGTTAT GTTTCGGTGG GCGATGTGCA AACGTCTCAA
CCTCTGGGAG CTGGCATGAG CGAAGAAGAA ACACGCTTCT TTGGTTTGAA ACGCGAATGC
GGACTGCATG AAGATGATGT AGAAGAGCAA GGAAGTGGGA TTTAG
 
Protein sequence
MTNRLNLTQL LSLDKAQQTE ALQEANDLLE NKTARERVEW AIEHLESEFV LSSSFGIQAA 
VCLHLITQVK ADTPIILTDT GYLFPETYRF IDALTEKLNL NLKTYRAEHS SAWQEARYGK
LWEQGVDGLT QYNLINKVEP MKRALKDLNA KTWFSGLRRS QASSRGKLPV LSIQNGCFKF
LPIIDWSNKD VHYYLSDHGL EYHPLWEQGY VSVGDVQTSQ PLGAGMSEEE TRFFGLKREC
GLHEDDVEEQ GSGI