Gene Ping_3429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3429 
Symbol 
ID4625620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4239405 
End bp4240394 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content45% 
IMG OID639798546 
Productpeptide chain release factor 2 
Protein accessionYP_944712 
Protein GI119947032 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00883546 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTGTCGTG AATTAGAATC ACCAGAAGTA TGGAGTGAAC CGGAACGCGC GCAGGCATTA 
GGTAAAGAGC GCAGTGCCTT AGAGTTGGTT GTTGACACTA TAGATGCGTT AAGTGCGGGA
ACCGAAGATA TTCTAATGCT GGTTGAGATG GCCACAGAAG AAAACGATCA GGACAGTTTT
GATGAAGCCC AAAAAGAAGT AAATGAGCTG GAAAAAAAAT TAGAGGTGTT AGAATTTCGC
CGTATGTTCT CCGGTAATCA CGATGCTTGC TCCTGCTATT TAGATATTCA ATCGGGCTCT
GGCGGAACAG AAGCTCAGGA CTGGGCAAAT ATACTCCTGC GTATGTACCT GCGTTGGGGA
GAAGCACACG GTTATAAAAC CGAGTTGATG GAAGTCTCCG CAGGGGATGT TGCCGGTATT
AAAGGAGCCA CCATTCGTTT TACTGGCGAA TATGCTTTTG GCTGGTTACG CACCGAAACC
GGTGTTCACC GCTTGGTTCG AAAATCACCC TTTGATTCAT CAGGGCGCCG TCATACCTCC
TTTGCATCTG CCTTTATCTA CCCTGAAATT GAAGATGATA TTGATATTCA GATTAACCCG
GCGGATTTAC GCATTGATGT GTACCGTGCA TCGGGCGCGG GCGGGCAACA CGTCAATACA
ACGGAATCTG CGGTACGTAT TACCCACGTA CCCACCAATA TTGTGGTGCA GTGTCAAAAT
GACCGCTCAC AACATAAGAA TAAAGATCAG GCAATGAAGC AGCTAAAAGC CAAATTGTAT
GAACATGAAT TGCAAAAGCA AAATGCCGAA AAACAAATCA GTGAAGACAG TAAATCAGAT
ATTGGCTGGG GCAGTCAAAT ACGTTCATAT GTTTTAGATG ATGCACGTAT CAAAGATTTA
AGAACCGGTA TTGAGAGTCG TAATACGCAA GCGGTATTGG ATGGTGGCTT GGATAAATTT
ATCGAAGCCA GTTTGAAGTC AGGACTGTAG
 
Protein sequence
MCRELESPEV WSEPERAQAL GKERSALELV VDTIDALSAG TEDILMLVEM ATEENDQDSF 
DEAQKEVNEL EKKLEVLEFR RMFSGNHDAC SCYLDIQSGS GGTEAQDWAN ILLRMYLRWG
EAHGYKTELM EVSAGDVAGI KGATIRFTGE YAFGWLRTET GVHRLVRKSP FDSSGRRHTS
FASAFIYPEI EDDIDIQINP ADLRIDVYRA SGAGGQHVNT TESAVRITHV PTNIVVQCQN
DRSQHKNKDQ AMKQLKAKLY EHELQKQNAE KQISEDSKSD IGWGSQIRSY VLDDARIKDL
RTGIESRNTQ AVLDGGLDKF IEASLKSGL