Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3398 |
Symbol | |
ID | 4625622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4200515 |
End bp | 4201315 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798514 |
Product | Cof-like hydrolase |
Protein accession | YP_944683 |
Protein GI | 119947003 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAGA TTGCAGCATC AGATCTCGAT GGCACGCTGT TGACATCGGA ACACCAAATC CTTCCCTTTA CTAAGCAGGT ATTGACGCAA TTGCATCGCC AGGGCACTGA CTTTATTTTT GCAACGGGTC GTCATCATAT TGATGTTGCA CATATGCGCA AACAGCTGGG CATTCCGGCA TTTATGATCA CCTCCAATGG TGCGCGTGTG CATAACTGTG AGAATGAAAT AATTTTCAAG CGCAATATAG CCCCGGATGT CATCAAAGGC ATGATTGAAA TGTTCCAAAG TGATCCGGAA ATTCAAGTTC ACCTCTACCG TAATGATGAC TGGCTAATCA GCAAAGAGGA CCCAAACAAC CCCTGTAAGC AGGAAAATTT TTCATACGGG CTATTTGATA TAAACAATCC ACCGTTGGAA AATATCGCTA AAATTTTTAT AAAACACCAG GATCAAAACC ACGAAAAACT GGTTATCTGG GAAAATAAAA TCAAAGCGGC ATTTCCAGGC CAGACCCATG TCACTTTTTC TTCACCCAAT TGTCTTGAAA TGATGGATGG CGGAGTGTCA AAAGGACATG CTCTTGACGC TATTGCTAAA ATGAAAGGTT ATGCACTAAA AGACTGTATC GCTTTTGGTG ATGGCATGAA TGATTTTGAA ATGCTTTCTA TGGCGGGAAA AGGTCTGGTA ATGGGCAGTG CGCACCATAA AGTAAAATCA GCGTTACCTA ATCATGAAAT CATAGGTCAC TGCGATGAAG AGGCTGTTGC GCATTATCTT GTCAAACATC TGCTCGAATA A
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Protein sequence | MYKIAASDLD GTLLTSEHQI LPFTKQVLTQ LHRQGTDFIF ATGRHHIDVA HMRKQLGIPA FMITSNGARV HNCENEIIFK RNIAPDVIKG MIEMFQSDPE IQVHLYRNDD WLISKEDPNN PCKQENFSYG LFDINNPPLE NIAKIFIKHQ DQNHEKLVIW ENKIKAAFPG QTHVTFSSPN CLEMMDGGVS KGHALDAIAK MKGYALKDCI AFGDGMNDFE MLSMAGKGLV MGSAHHKVKS ALPNHEIIGH CDEEAVAHYL VKHLLE
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