Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3383 |
Symbol | |
ID | 4625671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4178736 |
End bp | 4181306 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798499 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_944668 |
Protein GI | 119946988 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.130934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTAA GTGCGCAACA ATTACAACAA CATACCCCAA TGATGCAACA ATTTTTAACC ATCAAGAGCG AAGTGCCCGA CACTCTCCTT TTTTATCGCA TGGGTGATTT TTACGAATTA TTTTTTGATG ATGCACGTAA AGCCTCACAG CTTCTGGGTA TTTCTTTAAC CCAACGTGGT AAAACCGGTG GTAATGCCAT ACCCATGGCC GGTGTTCCAT ACCATAGTGT AGAAGGATAT TTAGCAAAAT TAATTGCAAT GGGAGAATCC ATTGCAATTT GCGAGCAAAT AGGTGATCCA GCCACTTCAA AAGGGCCTGT TGAACGAAAA TTGGTGCGTA TTATCACGCC GGGTACTGTT ACCGATGAAG CTTTACTTAA CGATCGTCAG GACAATTTAT TATGCTCGGT CTACCAGTTA CAAAATAGCT TTGGCATTGC GTCATTAGAT CTTGGTAGCG GTCGTTTTAT TATTAATCAA TTCCAGCATA CTGAAACCTT ACAAGCAGAA CTACAACGCC TTAATCCTGC CGAGCTTTTA TATCCTGAAA ACTTTGAACA TATGGATTTA ATAGAGCACC TACAAACCAT TCGTCGCCGC CCTGAATGGG AATTTGAGCT GGCCACCAGC AAAAAAATAT TAAATCAACA ATTTTCCACC AAGGATTTAA TCGGATTTGG TGTAGAAAAA GCAGAGGTTG CGCTTTGTGC CGCAGGCGCG TTACTGCAGT ATATTAAAGA TACCCAACGC ACCAGTTTGC CACATTTACA ATCGATCCAG TTAGAAAAAA ATATTGACAG TGTTATTTTA GATGCTGCAA CACGAAAAAA CTTAGAGTTA ACCCAGAACC TTTCCGGCGG CTTTGATAAT ACCTTAGCTG AAGTACTGGA TTTCACCGTC ACACCAATGG GAAGCAGACT ATTAAAACGT TGGATACATC AACCGATCCG CAATTTTAAT ACGCTAACTT ACCGCCAAAC GATGATCCAA ACCTTAATCG AACAGGATCT AAGCAGTGCC CTGGCTGACC CCCTAAAACA GATTGGTGAT GTTGAACGTG TTATTGCCCG ATTGGCATTA CGCTCTGCCC GTCCACGCGA TTTAACGCGC TTGCGTACCG CTTTTTCACT CTTACCAGAA CTCCAGCACC TGATCGCAGA CCTGCCAACT GAATTAGTCG GTAAGCTCAA TAAAGAGATG GGACTTTACC CAGAGCTGCT GACATTATTA GAAAAAGCAG TCATTGATAA TCCACCAGTT ATTATTCGCG ACGGTGGGGT TATCAAAGAG GGTTATAATG AAGAGTTAGA CCAGTGGCGA AATCTTGCCA AAGGCGCAAC CGATTATCTT GAGCAACTTG AAACTCGCGA ACGTCAGGCA ACCGGCATCA GCACCTTAAA AGTAGGCTAT AACCGTGTGC ATGGTTATTA TATAGAAACC AGTCGTTCAC AATCAGATAT TGTTCCTGCC CACTACATCC GCCGGCAGAC ACTGAAAAAT ACCGAACGTT ATATTATTGC TGAATTAAAA GAGCATGAAG ATAAGGTTTT ATCGAGCCGA GGCAAAGCGC TCGCCTTAGA AAAAAAGCTC TATGAGCAGT TAATCGACCT GTTATTACCG CATCTGCAAA ATTTACAGTC AACCGCGCAA GCACTGGCCG AGTTAGATGT CCTTAATAAC CTTGCAGAAC GCGCTGTGAC ACTCAATTAT GTGCGCCCTA CCTTACAAGC TGAAAATGGT ATTGAGATTG AAGAAGGCCG TCATCCGGTC GTTGAACAAG TGAGTAAAAC ACCTTTTATT GCCAATCCGG TTATGCTTAA TGATAAGCGT CGTATGCTGA TTATTACGGG TCCTAATATG GGCGGAAAAT CCACTTATAT GCGCCAGGTT GCACTAATGG TATTAATGGC ACATATCGGC AGTTTCATCC CTGCTCAGCA GGCAAAAATA GGCCCTGTGG ATCGTATTTT CACACGGATT GGTGCATCGG ATGATCTTGC CAGTGGACGT TCCACTTTTA TGGTTGAGAT GACCGAAACG GCTAATATTT TGCATAATGC CACCAAAAAC AGTTTGGTAT TAATGGATGA AATAGGCCGG GGCACCAGTA CTTTTGACGG TTTATCTCTG GCTTGGGCAT GTGCTGAACA ATTAGCCAAA AAAATCCAAG CCTACACGCT TTTTGCAACG CATTATTTTG AGTTAACCAA GCTACCTGAA AATATTCCCG AGTTAGTCAA TGTTCACCTG GATGCCGTTG AACATGGTGA TGCTATTGCC TTTTTGCATG CAGTACAGGA AGGTGCCGCT AATAAAAGTT ACGGTTTGCA GGTTGCCGCA TTAGCGGGTG TGCCAAAAGA GGTGGTGAGT AATGCCAAAA ATATATTACG TCAATTAGAA TTAGGCTCGC AGCCTCAAGC GAACTTAAAT GAAAAACCGC TGCAGACAAC CTTAGCTTTT GATGACGCGC AAACGAATCA GGCTCTGCTA TTATTGGCCA ACATTAATCC CGATGAGTTA ACCCCCAAAA AAGCGCTGGA GTTAATTTAT TTATTAAAAG AGCGGGCTTA G
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Protein sequence | MTLSAQQLQQ HTPMMQQFLT IKSEVPDTLL FYRMGDFYEL FFDDARKASQ LLGISLTQRG KTGGNAIPMA GVPYHSVEGY LAKLIAMGES IAICEQIGDP ATSKGPVERK LVRIITPGTV TDEALLNDRQ DNLLCSVYQL QNSFGIASLD LGSGRFIINQ FQHTETLQAE LQRLNPAELL YPENFEHMDL IEHLQTIRRR PEWEFELATS KKILNQQFST KDLIGFGVEK AEVALCAAGA LLQYIKDTQR TSLPHLQSIQ LEKNIDSVIL DAATRKNLEL TQNLSGGFDN TLAEVLDFTV TPMGSRLLKR WIHQPIRNFN TLTYRQTMIQ TLIEQDLSSA LADPLKQIGD VERVIARLAL RSARPRDLTR LRTAFSLLPE LQHLIADLPT ELVGKLNKEM GLYPELLTLL EKAVIDNPPV IIRDGGVIKE GYNEELDQWR NLAKGATDYL EQLETRERQA TGISTLKVGY NRVHGYYIET SRSQSDIVPA HYIRRQTLKN TERYIIAELK EHEDKVLSSR GKALALEKKL YEQLIDLLLP HLQNLQSTAQ ALAELDVLNN LAERAVTLNY VRPTLQAENG IEIEEGRHPV VEQVSKTPFI ANPVMLNDKR RMLIITGPNM GGKSTYMRQV ALMVLMAHIG SFIPAQQAKI GPVDRIFTRI GASDDLASGR STFMVEMTET ANILHNATKN SLVLMDEIGR GTSTFDGLSL AWACAEQLAK KIQAYTLFAT HYFELTKLPE NIPELVNVHL DAVEHGDAIA FLHAVQEGAA NKSYGLQVAA LAGVPKEVVS NAKNILRQLE LGSQPQANLN EKPLQTTLAF DDAQTNQALL LLANINPDEL TPKKALELIY LLKERA
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