Gene Ping_3383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3383 
Symbol 
ID4625671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4178736 
End bp4181306 
Gene Length2571 bp 
Protein Length856 aa 
Translation table11 
GC content43% 
IMG OID639798499 
ProductDNA mismatch repair protein MutS 
Protein accessionYP_944668 
Protein GI119946988 
COG category[L] Replication, recombination and repair 
COG ID[COG0249] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01070] DNA mismatch repair protein MutS 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.130934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTAA GTGCGCAACA ATTACAACAA CATACCCCAA TGATGCAACA ATTTTTAACC 
ATCAAGAGCG AAGTGCCCGA CACTCTCCTT TTTTATCGCA TGGGTGATTT TTACGAATTA
TTTTTTGATG ATGCACGTAA AGCCTCACAG CTTCTGGGTA TTTCTTTAAC CCAACGTGGT
AAAACCGGTG GTAATGCCAT ACCCATGGCC GGTGTTCCAT ACCATAGTGT AGAAGGATAT
TTAGCAAAAT TAATTGCAAT GGGAGAATCC ATTGCAATTT GCGAGCAAAT AGGTGATCCA
GCCACTTCAA AAGGGCCTGT TGAACGAAAA TTGGTGCGTA TTATCACGCC GGGTACTGTT
ACCGATGAAG CTTTACTTAA CGATCGTCAG GACAATTTAT TATGCTCGGT CTACCAGTTA
CAAAATAGCT TTGGCATTGC GTCATTAGAT CTTGGTAGCG GTCGTTTTAT TATTAATCAA
TTCCAGCATA CTGAAACCTT ACAAGCAGAA CTACAACGCC TTAATCCTGC CGAGCTTTTA
TATCCTGAAA ACTTTGAACA TATGGATTTA ATAGAGCACC TACAAACCAT TCGTCGCCGC
CCTGAATGGG AATTTGAGCT GGCCACCAGC AAAAAAATAT TAAATCAACA ATTTTCCACC
AAGGATTTAA TCGGATTTGG TGTAGAAAAA GCAGAGGTTG CGCTTTGTGC CGCAGGCGCG
TTACTGCAGT ATATTAAAGA TACCCAACGC ACCAGTTTGC CACATTTACA ATCGATCCAG
TTAGAAAAAA ATATTGACAG TGTTATTTTA GATGCTGCAA CACGAAAAAA CTTAGAGTTA
ACCCAGAACC TTTCCGGCGG CTTTGATAAT ACCTTAGCTG AAGTACTGGA TTTCACCGTC
ACACCAATGG GAAGCAGACT ATTAAAACGT TGGATACATC AACCGATCCG CAATTTTAAT
ACGCTAACTT ACCGCCAAAC GATGATCCAA ACCTTAATCG AACAGGATCT AAGCAGTGCC
CTGGCTGACC CCCTAAAACA GATTGGTGAT GTTGAACGTG TTATTGCCCG ATTGGCATTA
CGCTCTGCCC GTCCACGCGA TTTAACGCGC TTGCGTACCG CTTTTTCACT CTTACCAGAA
CTCCAGCACC TGATCGCAGA CCTGCCAACT GAATTAGTCG GTAAGCTCAA TAAAGAGATG
GGACTTTACC CAGAGCTGCT GACATTATTA GAAAAAGCAG TCATTGATAA TCCACCAGTT
ATTATTCGCG ACGGTGGGGT TATCAAAGAG GGTTATAATG AAGAGTTAGA CCAGTGGCGA
AATCTTGCCA AAGGCGCAAC CGATTATCTT GAGCAACTTG AAACTCGCGA ACGTCAGGCA
ACCGGCATCA GCACCTTAAA AGTAGGCTAT AACCGTGTGC ATGGTTATTA TATAGAAACC
AGTCGTTCAC AATCAGATAT TGTTCCTGCC CACTACATCC GCCGGCAGAC ACTGAAAAAT
ACCGAACGTT ATATTATTGC TGAATTAAAA GAGCATGAAG ATAAGGTTTT ATCGAGCCGA
GGCAAAGCGC TCGCCTTAGA AAAAAAGCTC TATGAGCAGT TAATCGACCT GTTATTACCG
CATCTGCAAA ATTTACAGTC AACCGCGCAA GCACTGGCCG AGTTAGATGT CCTTAATAAC
CTTGCAGAAC GCGCTGTGAC ACTCAATTAT GTGCGCCCTA CCTTACAAGC TGAAAATGGT
ATTGAGATTG AAGAAGGCCG TCATCCGGTC GTTGAACAAG TGAGTAAAAC ACCTTTTATT
GCCAATCCGG TTATGCTTAA TGATAAGCGT CGTATGCTGA TTATTACGGG TCCTAATATG
GGCGGAAAAT CCACTTATAT GCGCCAGGTT GCACTAATGG TATTAATGGC ACATATCGGC
AGTTTCATCC CTGCTCAGCA GGCAAAAATA GGCCCTGTGG ATCGTATTTT CACACGGATT
GGTGCATCGG ATGATCTTGC CAGTGGACGT TCCACTTTTA TGGTTGAGAT GACCGAAACG
GCTAATATTT TGCATAATGC CACCAAAAAC AGTTTGGTAT TAATGGATGA AATAGGCCGG
GGCACCAGTA CTTTTGACGG TTTATCTCTG GCTTGGGCAT GTGCTGAACA ATTAGCCAAA
AAAATCCAAG CCTACACGCT TTTTGCAACG CATTATTTTG AGTTAACCAA GCTACCTGAA
AATATTCCCG AGTTAGTCAA TGTTCACCTG GATGCCGTTG AACATGGTGA TGCTATTGCC
TTTTTGCATG CAGTACAGGA AGGTGCCGCT AATAAAAGTT ACGGTTTGCA GGTTGCCGCA
TTAGCGGGTG TGCCAAAAGA GGTGGTGAGT AATGCCAAAA ATATATTACG TCAATTAGAA
TTAGGCTCGC AGCCTCAAGC GAACTTAAAT GAAAAACCGC TGCAGACAAC CTTAGCTTTT
GATGACGCGC AAACGAATCA GGCTCTGCTA TTATTGGCCA ACATTAATCC CGATGAGTTA
ACCCCCAAAA AAGCGCTGGA GTTAATTTAT TTATTAAAAG AGCGGGCTTA G
 
Protein sequence
MTLSAQQLQQ HTPMMQQFLT IKSEVPDTLL FYRMGDFYEL FFDDARKASQ LLGISLTQRG 
KTGGNAIPMA GVPYHSVEGY LAKLIAMGES IAICEQIGDP ATSKGPVERK LVRIITPGTV
TDEALLNDRQ DNLLCSVYQL QNSFGIASLD LGSGRFIINQ FQHTETLQAE LQRLNPAELL
YPENFEHMDL IEHLQTIRRR PEWEFELATS KKILNQQFST KDLIGFGVEK AEVALCAAGA
LLQYIKDTQR TSLPHLQSIQ LEKNIDSVIL DAATRKNLEL TQNLSGGFDN TLAEVLDFTV
TPMGSRLLKR WIHQPIRNFN TLTYRQTMIQ TLIEQDLSSA LADPLKQIGD VERVIARLAL
RSARPRDLTR LRTAFSLLPE LQHLIADLPT ELVGKLNKEM GLYPELLTLL EKAVIDNPPV
IIRDGGVIKE GYNEELDQWR NLAKGATDYL EQLETRERQA TGISTLKVGY NRVHGYYIET
SRSQSDIVPA HYIRRQTLKN TERYIIAELK EHEDKVLSSR GKALALEKKL YEQLIDLLLP
HLQNLQSTAQ ALAELDVLNN LAERAVTLNY VRPTLQAENG IEIEEGRHPV VEQVSKTPFI
ANPVMLNDKR RMLIITGPNM GGKSTYMRQV ALMVLMAHIG SFIPAQQAKI GPVDRIFTRI
GASDDLASGR STFMVEMTET ANILHNATKN SLVLMDEIGR GTSTFDGLSL AWACAEQLAK
KIQAYTLFAT HYFELTKLPE NIPELVNVHL DAVEHGDAIA FLHAVQEGAA NKSYGLQVAA
LAGVPKEVVS NAKNILRQLE LGSQPQANLN EKPLQTTLAF DDAQTNQALL LLANINPDEL
TPKKALELIY LLKERA