| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3378 |
|---|
| Symbol | |
|---|
| ID | 4625693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 4172257 |
|---|
| End bp | 4172433 |
|---|
| Gene Length | 177 bp |
|---|
| Protein Length | 58 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639798494 |
|---|
| Product | carbon storage regulator, CsrA |
|---|
| Protein accession | YP_944663 |
|---|
| Protein GI | 119946983 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000923466 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATAT TAACACGCCG AGTTGGTGAA ACACTGATGA TAGGCGATAA TGTTACCGTG
ACCGTTTTAG GTGTAAAAGG TAATCAAGTA AGAATTGGTG TAAACGCACC GAAAGAAGTA
TCGGTTCACC GTGAAGAAAT TTATATGCGG ATTCAAGCCG AAAAAAGCGG TGAATAA
|
|---|
| Protein sequence | MLILTRRVGE TLMIGDNVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYMR IQAEKSGE
|
|---|
| |