Gene Ping_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3376 
Symbol 
ID4625687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4168927 
End bp4170741 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content44% 
IMG OID639798488 
Productoxaloacetate decarboxylase 
Protein accessionYP_944661 
Protein GI119946981 
COG category[C] Energy production and conversion 
COG ID[COG5016] Pyruvate/oxaloacetate carboxyltransferase 
TIGRFAM ID[TIGR01108] oxaloacetate decarboxylase alpha subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.709986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAGC AAGTAAATAT GTCTAAGCCT CTCGGCATCA CTGAAGTTGT CCTACGCGAT 
GCGCATCAAT CATTATTTGC AACACGGATG CGCACTGAGG ATATGTTACC TATTGCGGAG
AAGTTGGATA AAATTGGCTT CTGGTCATTA GAGACATGGG GTGGGGCTAC ATTTGATTCC
TGTATCCGCT TTTTAGGAGA AGATCCATGG GAACGCCTGC GTGCTTTAAA AGCAGCCATG
CCTAATACGC CTCAGCAAAT GTTATTACGC GGTCAAAATT TATTAGGTTA CCGCCATTAT
GCCGATGATG TTGTTGAAAA ATTTGTAGAG CGTGCCCATA CCAATGGTGT GGATGTCTTC
CGTATATTTG ATGCAATGAA TGATGTGCGC AATTTTGAAA CCGCGGTTAA ATCGGCGGTT
AAAATTGGTG CGCACGCCCA GGGTGCTATT TCTTATACCA CTAGCCCTGT GCACACTGTT
GATAACTGGG TCGATATGGC AAAACGCCTT GAGGATATGG GATGTCATTC TTTATGTATT
AAAGATATGG CGGGTTTATT AAAGCCCTAT GTTGCAGAAG AGTTGATTAC AAAAATCAAG
GCAAGTACCA ATATTCCGTT AGCGTTACAT TGTCATGCAA CGACTGGCCT TAGCATCGCA
ACGCACCAAA AAGCGATTGA TTCCGGTATT GATATTATTG ATTCTGCCAT CTCTTCTATG
TCGATGACCT ATGGACATAC TCCAACTGAA ACACTTGTTT CAATTGTTGA AGGTGAAGCG
CGAGATACGG GTCTAGAACT GCCTAAACTT GCAGAGATAT CCGCTTACTT TCGTGATGTC
CGTAAAAAAT ATGTGAAATT TGAAGGTGAA TTAAAAGGTG TTGATCCGCG CATCCTGATT
GCCCAAGTGC CCGGCGGCAT GTTAACTAAC ATGGAAAGCC AGCTTAAAGA GCAGGGCGCT
GCAGACAAGA TGGATCAAGT GTTGGCCGAA ATCACCGCAG TGCGTAAAGA TCTTGGTTAT
ATTCCGCTGG TTACCCCGAC CTCTCAAATT GTCGGTACGC AAGCTGTTAT TAATGTATTG
ATGGGCGAGC GTTATAAAAA TATAACCAAA GAAACTGCCG GCGTGTTAAA AGGAGAGTAT
GGCGCAACAC CAGCTCCTGT TAATGCTGAG CTGCAGGCGA AAGTATTAGA GGGCGGAACT
GCAATTACTT GTCGTCCTGC TGATAACATT GCGCCTGAAA TGAAAAATAT CCAGGCCGAA
TTTAAGAAAC TTGCCACTGA AAAAGGCATT AAAATTGCGC AACATGAGAC TGATGATGCA
TTGATTTATG CTTTATTTCC TGAAATTGGT CTTAAATTTT TAGAAAACCG TAATAACCCC
GATGCATTTG AGCCCGTCCC CAGCGCTGAC GATGTTAAAC CAGCGGCTAA AACGGCAACT
AAGGCGCAAC AAGGTGGTGC AGAAACTTAT TCAGTGGCCG TTGATGGGCA ATTATATACT
GTCCAAGTTG GCCCTGAAGG CAGTGTGGAA GGCATAAAAG CAGGACCGCC GAGCGCAACT
TTGTCAGCCT CAGCCTCAGC TTCAACCGAA GCGACAGTGA TGAGCGAGGA ATTACCAGCA
CCATTGGCGG GTAATATCTT TAAAGTGTTG GTTAGTGAAG GTGAGAAGGT TGAGGAAGGC
GATGTGCTTT TGATAATGGA AGCGATGAAG ATGGAAACTG AGATTCGAGC ACCAAAATCG
GGGGTTATCC AAGGCGTTTT TGTCAAAGAA GGTTCTTCTG TTGCCGTGGG TGAAACCCTG
TTTAAAATAG CTTAA
 
Protein sequence
MKEQVNMSKP LGITEVVLRD AHQSLFATRM RTEDMLPIAE KLDKIGFWSL ETWGGATFDS 
CIRFLGEDPW ERLRALKAAM PNTPQQMLLR GQNLLGYRHY ADDVVEKFVE RAHTNGVDVF
RIFDAMNDVR NFETAVKSAV KIGAHAQGAI SYTTSPVHTV DNWVDMAKRL EDMGCHSLCI
KDMAGLLKPY VAEELITKIK ASTNIPLALH CHATTGLSIA THQKAIDSGI DIIDSAISSM
SMTYGHTPTE TLVSIVEGEA RDTGLELPKL AEISAYFRDV RKKYVKFEGE LKGVDPRILI
AQVPGGMLTN MESQLKEQGA ADKMDQVLAE ITAVRKDLGY IPLVTPTSQI VGTQAVINVL
MGERYKNITK ETAGVLKGEY GATPAPVNAE LQAKVLEGGT AITCRPADNI APEMKNIQAE
FKKLATEKGI KIAQHETDDA LIYALFPEIG LKFLENRNNP DAFEPVPSAD DVKPAAKTAT
KAQQGGAETY SVAVDGQLYT VQVGPEGSVE GIKAGPPSAT LSASASASTE ATVMSEELPA
PLAGNIFKVL VSEGEKVEEG DVLLIMEAMK METEIRAPKS GVIQGVFVKE GSSVAVGETL
FKIA