Gene Ping_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3356 
Symbol 
ID4625701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4148234 
End bp4149094 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content38% 
IMG OID639798468 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_944641 
Protein GI119946961 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0320622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TTGGGTTTAT AGGCTTAGGA ATTATGGGTA ATGCAATGGC ATTAAACTTG 
GTTAAAGCAG GGCTAGATGT AACAGTTTGG AATCGAAATG TTGATAAATG TACTGAACTG
GTTGCACTGG GCGCTCATCA AGGAAAAACA CCAAGAGAAG TAGCAGAAAC ATGCGATATC
ACTTTTACTA TTGTTTCTGA TCCTGCAGCT GCTTTAGCTA TTTCTGAAGG GCCTGATGGC
GTAGTGGCAG GCATTGGTGA AGGTCGTAGT TATATTGATA TGTCTACTGT TGATGATGCG
ACTTCACAAA CTATTTCAGC AGCAATAATA AAAGCAGGCG GGCGCTTTTT AGAAGCTCCT
GTTTCTGGGA CAAAAAAACC AGCGGAAGAT GGCACTTTAA TTATTTTAGC AGCAGGAGAT
AAGTCCCTTT ATGATGATGC CTTACCCGCC TTTGAAATAA TGGGGAAAAT GTCTCCATAC
TTGGGTGAGG TTGGTCAGGG CGCTAAAATG AAACTTGTAG TCAATATGAT TATGGGTGGA
ATGTTAAGTA TTTTCAGTGA AGGAATATCA CTCGGCCTTA AAGCAAACCT TGATGGTAAA
CAGTTACTAG ATATTATTGA TGCAGGTGCA ATGGCAAACC CTATGTTTAA AGTTAAAGGG
CCAATGCTAT TAGATGAAAA TTACACTACA AGCTTTCCTC TTAAACATAT GCAAAAAGAC
ATGAGATTAG CTGTAGATTT AGGTGATAAA TTAAATTTAA CGTTACCGAC TGCCGCTATT
ACAAATGAAT CTTTCAAACA AGCACGTAAA GCTGGTTTTT CAGATGAAGA CATAGCTGCA
ATTTATAAAA CAGTGAAATA A
 
Protein sequence
MKKFGFIGLG IMGNAMALNL VKAGLDVTVW NRNVDKCTEL VALGAHQGKT PREVAETCDI 
TFTIVSDPAA ALAISEGPDG VVAGIGEGRS YIDMSTVDDA TSQTISAAII KAGGRFLEAP
VSGTKKPAED GTLIILAAGD KSLYDDALPA FEIMGKMSPY LGEVGQGAKM KLVVNMIMGG
MLSIFSEGIS LGLKANLDGK QLLDIIDAGA MANPMFKVKG PMLLDENYTT SFPLKHMQKD
MRLAVDLGDK LNLTLPTAAI TNESFKQARK AGFSDEDIAA IYKTVK