Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3354 |
Symbol | |
ID | 4625699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4144889 |
End bp | 4146778 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639798467 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_944640 |
Protein GI | 119946960 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.778526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0858286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC AATACAATTC AGACTCGATC GAGGTATTAA ACGGTCTTGA TCCCGTTCGC CACCGTCCGG GAATGTACAC CGACACATCA CGTCCGAATC ATCTTGGTCA GGAAGTTATC GACAATAGTG TGGATGAAGC GCTAGCGGGG CATGCGGCGA CTATCCAAGT GATTTTACAC GAGGATCAAT CATTAGAAGT TATTGATGAT GGACGTGGTA TGCCGGTTGA TATTCACCCT GAAGAGCGTA TTTCAGGTGT TGAGCTTATT TTCTGTAAAT TACATGCAGG GGGTAAATTT TCAGGTAAAA ATTACGAAAT ATCTGGTGGT CTTCACGGTG TTGGGATCTC CGTCGTTAAT GCATTATCAA AACGTGTTGA TGTGAGTATT CGTCGTGATG GTCAAGTGTA TGAAATTGCC TTTGAAAATG GTGAAAAGGT TGAGGAGTTA CACGTAACGG GAGTCTGTGG AAAACGCAAT ACAGGTACGA CAGTACATTT TCATCCCGAT CCCGCTTACT TTGACAGCGC CCGCTTTTCA GTGTCCCGTT TACTGCATCT GTTAAAAGCC AAAGCCGTCT TATGTGCGGG TCTTACCATC AAATTTAAAG ACAAAGTAAA TAAAAATGAC TATCAGTGGT GCTATCAAGA TGGTTTAAAT GATTACCTGC TGGAAGCTGT TGCAGACAAC GAGTTATTAC CACCGCAGCC CTTTACTGGC AAGTTTTCAG CAAAAAGTGA AACAGCAGAG TGGTCGGTAG TGTGGTTACC CGATGGCGGG CCTTCACTAT CAGAAAGTTA CGTAAATTTA ATACCGACAG TGCAGGGCGG CACACACGTT AATGGTTTTA GGCAGGGACT GCTGGATGCA ATGCGTGAGT TCTGTGATAT TCGTAACCTT CTACCGCGCG GTCTAAAATT AAGCCCGGAA GATATTTGGG ATAGATGTGC CTATATCCTT TCGGTTAAAA TCAAAGAGCC GCAGTTTGCC GGACAAACTA AAGAACGACT CTCATCAAGG CAGTGCGTCG CTTTTGTTTC CGGTATAGTA AAAGATGCCT TTAGTTTATG GCTCAATGCG CATGTTAATG AGGCTGAGTT ACTGGCTGAC TTCTGCATTA ATAATGCCCA GACCCGGACG CGTAAAACTA AAAAAATTGC CCGTAAAAAA ATAACTCAAG GCCCCGCTCT TCCAGGTAAA TTAACTGATT GTTCGACTCA GGAAACCATG CGTGGGGAGA TTTTTTTAGT TGAAGGTGAT TCGGCTGGTG GCTCTGCAAA ACAGGCGCGG GATCGCGAGT TTCAGGCTAT TATGCCGTTA CGGGGAAAAA TCAAAAATAC CTGGGAAGAC GACTCTGATA TTATTTTAAA TTCCGAAGAA ATACATAATA TATCCGTGGC GATAGGAATC GATCCTGCTT CCTCGGACTT ATCCGGTTTA CGTTATGGAA AAATCTGTAT CCTTGCCGAT GCCGATTCCG ATGGTCTGCA TATCGCGACG CTTATCTGCG CCTTGTTCGT TCGTCATTTT AGAGCCGTGG TTGATGCCGG ACACCTGTTT GTCGCGATGC CGCCATTATA CCGAATCGAC ATAGGTAAAG AGGTTTATTA TGCCTTGGAT GAAGCAGAAA AAGACGGGGT GTTAGACCGT ATCGAAGCGG AGAAAAAACG CGGTAAAGTC AATGTTCAGC GCTTTAAAGG TTTGGGTGAA ATGAACCCGT TGCAGTTACG TGAAACGACT ATGGATCCTA ATACTCGCCG TTTAGTTCAG CTGACGACCG AAGGCGCTGA GGAAATGTTA GAAATGATGG ATATGTTACT GGCGAAAAAA CGCGCAGGAG ATCGTAAAGT CTGGCTTGAA GATAAAGGTG ATATGGCATC GGTTGATTAA
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Protein sequence | MSDQYNSDSI EVLNGLDPVR HRPGMYTDTS RPNHLGQEVI DNSVDEALAG HAATIQVILH EDQSLEVIDD GRGMPVDIHP EERISGVELI FCKLHAGGKF SGKNYEISGG LHGVGISVVN ALSKRVDVSI RRDGQVYEIA FENGEKVEEL HVTGVCGKRN TGTTVHFHPD PAYFDSARFS VSRLLHLLKA KAVLCAGLTI KFKDKVNKND YQWCYQDGLN DYLLEAVADN ELLPPQPFTG KFSAKSETAE WSVVWLPDGG PSLSESYVNL IPTVQGGTHV NGFRQGLLDA MREFCDIRNL LPRGLKLSPE DIWDRCAYIL SVKIKEPQFA GQTKERLSSR QCVAFVSGIV KDAFSLWLNA HVNEAELLAD FCINNAQTRT RKTKKIARKK ITQGPALPGK LTDCSTQETM RGEIFLVEGD SAGGSAKQAR DREFQAIMPL RGKIKNTWED DSDIILNSEE IHNISVAIGI DPASSDLSGL RYGKICILAD ADSDGLHIAT LICALFVRHF RAVVDAGHLF VAMPPLYRID IGKEVYYALD EAEKDGVLDR IEAEKKRGKV NVQRFKGLGE MNPLQLRETT MDPNTRRLVQ LTTEGAEEML EMMDMLLAKK RAGDRKVWLE DKGDMASVD
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