Gene Ping_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3349 
Symbol 
ID4625728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4138961 
End bp4140118 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content44% 
IMG OID639798462 
Productalcohol dehydrogenase, iron-containing 
Protein accessionYP_944635 
Protein GI119946955 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0753084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.450631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAATT TCAGTTTTCA AAATCAGACA CGTATTCATT TTGGTGAAGG TCAAATCGAT 
AAACTCTCTA CCGAGATCCC AAAGGATGCC AAAGTATTAG TTGTTTATGG CGGTGGTTCC
ATAAAAAATA ATGGCGTTTA TGATCAGGTG GTCAATGCGT TAAAAGATCA TACTTGGTTT
GAATTTTCAG GCATTGAGCC TAATCCAAAG TACGATACTT TAATGAAAGC GCAGGCCGTC
ATTAAAGAGC ATGATATCGA TTATATAATG GCTGTTGGTG GCGGTTCTGT GGCTGACGGT
TGTAAATTTA TTGCGGCAGC AGCGCTTTAT GCGGGTGATG ATCCTTGGGA TATTCTGGCT
AAACAACAGC CGATAGAAAG TGCCTTACCG ATTGGTGTTG TGCTGACCTT ACCGGCAACC
GGTTCTGAGA CAAATACTAA TGCTGTGGTA ACACGTGACG GCAATAAATT ACCCTTCTCA
AGTGCTGCGG TGCGGCCACA ATTTGCAGTG TTAGATCCTG CGGTTACTCT GTCGTTATCG
GATCGACAAA TCAGTAACGG TGTGGTGGAT GCTTTTATCC ATACTATGGA GCAGTACCTT
ACCTATAGTG TTAGTGGAAA AGTACAAGAC CGTTTTGCTG AAGGTCTATT ACAAACCTTA
ATTGAAGAAG GGCCTAAAGC GCTGCAGCCG GAAACCAAAG ATAATCTTGA CGTCCGCGCT
AATATTATGT GGTCTGCCAC TATGGCATTA AATGGTCTGA TTGGTGCCGG TGTACCGCAG
GATTGGGCTA CCCATATGAT AGGTCATGAG CTGACGGGCG CTTACGAAAT TGATCATGCG
CGTACTCTGT CGATTGTTTT ACCTGCAGTA ATGAAAGTGC GCCGGACAGC GAAACATGAA
AAACTGCTGC AATATGCAGA GCGTGTTTGG CATATTACCC AGGGCAGTGA AGATCAGAGA
ATTGATCAAG CTATCGCCTT GACGGAAGAT TTTTTCCAGA AAATGGCGAT GCCTATCCGC
TTGTCAGATA TTGAATTAGG CGCCGCAGAT ATTGATATTC TAATGGCTAA TCTGGAAGGT
CATGGCATGG TGGAGCTAGG TGAAACGAAA GAAATTACCC TTGCAATCAG TCGCCAAATA
TTAGAACAAG CAAGTTAA
 
Protein sequence
MLNFSFQNQT RIHFGEGQID KLSTEIPKDA KVLVVYGGGS IKNNGVYDQV VNALKDHTWF 
EFSGIEPNPK YDTLMKAQAV IKEHDIDYIM AVGGGSVADG CKFIAAAALY AGDDPWDILA
KQQPIESALP IGVVLTLPAT GSETNTNAVV TRDGNKLPFS SAAVRPQFAV LDPAVTLSLS
DRQISNGVVD AFIHTMEQYL TYSVSGKVQD RFAEGLLQTL IEEGPKALQP ETKDNLDVRA
NIMWSATMAL NGLIGAGVPQ DWATHMIGHE LTGAYEIDHA RTLSIVLPAV MKVRRTAKHE
KLLQYAERVW HITQGSEDQR IDQAIALTED FFQKMAMPIR LSDIELGAAD IDILMANLEG
HGMVELGETK EITLAISRQI LEQAS