Gene Ping_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3348 
Symbol 
ID4625727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4137805 
End bp4138848 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content45% 
IMG OID639798461 
Productalcohol dehydrogenase 
Protein accessionYP_944634 
Protein GI119946954 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.597371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.442758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CTAAACAAGT CAATCGCCAA TTTTTATTAG CATCGCGTCC GGTTGGCGCG 
CCCGTCCGCG CTGATTTTAA TCTGGTTGAA ACAGCTGTCC CGGCAATTAA AGAAGGTGAG
GTTTTATTAC GCAGCGTCTA TCTTTCTTTA GATCCTTATA TGCGTGGTCG TATGAGTGAT
GCTAAATCCT ATGCGCCGGC GGTGGAATTG GGAGAGCCTC TGGTTGGTGG AGCAGTATGC
CGTATTGAAC AGTCACATAA TCCTGATTTT GTAGTGGGGG ATTGGGTTGT CGCCTTTGCC
GGATGGCAAG ATTATGCGGT CTCTGACGGT CAGAGTCTGC TTAAAATCGA TGCCAGCCTG
GCACACCACT CCTATGCGCT GGGTGTGTTA GGAATGCCTG GTTTAACCGC TTATATGGGC
TTACTCGATA TTGGTCAACC ACAGGCCGGT GAAACCGTAG TGGTTGCCGC AGCAACCGGC
GCAGTCGGTA GTTTAGTTGG ACAAATAGCT AAATTAAAAG GCTGTAAAGT GGTCGGGATT
GCGGGCGGTG CAGAAAAATG CAGGTACGCA GTTGAGCAGT TGGGGTTTGA TTTTTGTCTG
GATCATAAAT CGGAAAATTT AGCAGAGCAA TTAAGCAAGG CCTGCGATAA CGGTATCGAT
GTCTACTTTG AAAGTGTTGG CGGTAAGGTT TTTGATGCCG TTTTTCCATT ATTAAACACT
AAAGCACGTA TTCCTGTCTG TGGTTTAATC TCACAATATA ACGCCACAGA GCTTCCTGAG
GGCCCCGATA GACTTTCTAT GCTGATGGGT ACTTTGTTAG TTAAACGCAT TAAAGCCCAG
GGATTTATTG TTTTTGATGA TTATGGTGAT CGCTATAATG AGTTTAGTGA AGCGATGGGG
GAATGGTTAA GTGACGGAAA AATTAAATAT AAAGAGCAGA TTGTCGATGG TTTAGAAAAT
GCACCATCTG CTTTTATCGG GCTGCTGCAG GGTGAAAACT TTGGTAAGCT TATCGTGCGT
GTTGGACCTG ATAATTTACA GTAA
 
Protein sequence
MSQTKQVNRQ FLLASRPVGA PVRADFNLVE TAVPAIKEGE VLLRSVYLSL DPYMRGRMSD 
AKSYAPAVEL GEPLVGGAVC RIEQSHNPDF VVGDWVVAFA GWQDYAVSDG QSLLKIDASL
AHHSYALGVL GMPGLTAYMG LLDIGQPQAG ETVVVAAATG AVGSLVGQIA KLKGCKVVGI
AGGAEKCRYA VEQLGFDFCL DHKSENLAEQ LSKACDNGID VYFESVGGKV FDAVFPLLNT
KARIPVCGLI SQYNATELPE GPDRLSMLMG TLLVKRIKAQ GFIVFDDYGD RYNEFSEAMG
EWLSDGKIKY KEQIVDGLEN APSAFIGLLQ GENFGKLIVR VGPDNLQ