Gene Ping_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3344 
Symbol 
ID4625723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4133611 
End bp4134609 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content42% 
IMG OID639798457 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_944630 
Protein GI119946950 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAG ACAACATAAC CATGATCACT GCCAATTTCT CTGTTGTGGT GCAGCAAATC 
AATGAAGCGA TGCCGTTATG GTTTCAACAG GGTGGCCTAA TAATGTGGTT GTTACTGTTA
ACTTCATTTT TAACCACTGT TGTCACTCTG GAGCGTTGTT TTGTTTGGCT CCATTACTAC
TTTAAGAAAG AACACTTGCC ACTGCTCGAT TGTTTTGCCT ATTTAAATAA AAAAGAAAAA
ACCAAGGCAC TGCTCGCATG CCAGCGTTTA GATACACCCG CTTTAAATAT GTTGGCATTT
GGTATCAACG CCCTGCCATT TTCGCCCAAT GAAAAAATGG AATCCTACGC AGAACGGAAA
ATCCACAATA TGTCCCGCGG GCAAACTTTA CTCGATACCG TGATAACCCT TGCCCCAATG
CTTGGCATCT TAGGCACAGT ATTGGGTATT ATTCACTCTT TTAATATTCT CGGTGTACAG
GGAGTCAACA ACCCCACTGA GGTCGTTGCA GGTATCGCAC AGGCTTTAGT GTCAACTGCG
ATGGGTTTAT CGGTTGCGCT ATTGGCATTA TTACCCTTTA ATCTATTTCG CGCACTACTG
CAAAGACTGA CACTGCATTT GGAAGGTGTG GGCAGTGAAT TTTATCATAT TTGCCATCAG
CAGCGCCTTA TCTCCAATGA GCTCAGTGAA ATTATGAAAA CGCAAGAGTT GAGTCGTACT
AACAAGGATA ACGAAGAAGT GTTTAAGTAC ACAGTGCAGA AAGACAGTGA AATGCCTTAT
CATTACGAGT TTAAAGAGGG GTCAGATGAA GTGAAGGTTA ATCTTCATGA GGAAATGAAA
GAGCTGCATA AAACCTCGCA GGAATCACTG GCCGAGATGT ACACCAGCCC CATTAGTAAA
AAGAAAGAGT ATTTCAGCAT TGATGAGCTT AAATTACAAA AGCAGAAAGA GACTGCTCGG
CAGGTACAAA AAGAGTCTTT CAGGAATAAA ACGCGATGA
 
Protein sequence
MAIDNITMIT ANFSVVVQQI NEAMPLWFQQ GGLIMWLLLL TSFLTTVVTL ERCFVWLHYY 
FKKEHLPLLD CFAYLNKKEK TKALLACQRL DTPALNMLAF GINALPFSPN EKMESYAERK
IHNMSRGQTL LDTVITLAPM LGILGTVLGI IHSFNILGVQ GVNNPTEVVA GIAQALVSTA
MGLSVALLAL LPFNLFRALL QRLTLHLEGV GSEFYHICHQ QRLISNELSE IMKTQELSRT
NKDNEEVFKY TVQKDSEMPY HYEFKEGSDE VKVNLHEEMK ELHKTSQESL AEMYTSPISK
KKEYFSIDEL KLQKQKETAR QVQKESFRNK TR