Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3329 |
Symbol | |
ID | 4625743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4111289 |
End bp | 4114195 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639798439 |
Product | hybrid sensor and regulator fused |
Protein accession | YP_944615 |
Protein GI | 119946935 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTTA CTTCGCTGAA ATTTAAGGTG GTGGCGCTGA TTCTGCTGGT GCTGGTGATC ACTTCTGCGG CTACTTTGTA CTTTACTCAA CGTGATGTCG GCAGCGCTAT GCTTCGGGCG GAGCAGTCAT CGGCTGAAAA TGTGCTGCAA CTGGCTGAAC TGAATATTCG CAGTAGTTAC GATCAGCTAA TCAGTGACAA AATTGAGCTG TTAACACAGT TAAAAAAAGA GATGGTACAG ACTGCAAAAG TAAGCAATTC TGTGCTGCAC GAATTTATGC TGCTGAGTCA AGGTGGCCGT TTGTCAAAAG AGGAAGCGCA GCAAAGAGCA AAGCGCTGGT TGTCTAAAGT TGATTACCCT AGCGGTGACA TTTTTCTGTT TGATCACAAG GGTACTATCC TTTCCTCTAG TCAATCTAAG CTCAATGGGG TGGCTATTAC TGATATTCGG GACGTTAAAG GGCGTTTGAT TTATGACGCG ATGCGGGACG ATCAGTTAGA ACCGCGCGGC GATACGGCGA TATTTTCCTG GCAGAAACCT TGGCAGACAA AACCGAGTCA ATTTATGGGA CAGTTTCTGC CCGTTAATGG TTGGTCCTGG ACCTTGGCTG TGGTTGTCAA TTTTGATAAT GTTGAGCAGG AAAGCCAGCG TAAGATGGAC AGTATTATTG CCACCCTGAC CCAAACCTTT ACTAAGATTC AGATAGCAAA AACTGGCTAT GCTTTTCTCT TTGATGGTGA TAAAAAAATT CTTATTGCCC CTCCGGAAGA TAACTTAGAT AACTTAGATA ACTTAGATAA GTTTAAAGAT ACCTCCGGGT GGCTGCCCCG ATACAGCAGC GTACTGGATA AAATTATTGC CGTAAATGGC AAAAATAAGA GCGCCATCAG TTATAACGAT CCCTTTTCCG GTGATCGTGA GGTAGAAGTT TTCACCAGCT ACTTTAAAGC ATTCGACTGG TATCTGGGGG TGGTCGTTCC GATGGCCGAA ATCAAAGCGC CGGGTAAAAA CCTTATCAAG CGGCAGAGTA TTATTATTGC CCTGATTTCT CTGGTAGGTT TAGCTGCCGC ACTGCTTTTA GTGTTTCGAA TCTCCCGTCC GCTGAACACC CTGGCATCTT ATGCTAAGGC ATTACCAACC CAGGATTTCA GTCAGCAAAA CCCTGACACC ATAAAAATCA AACGTTTGGC GATGAAATAT AGTGATGAAG TGGGGCGTCT GGCGGAGTCT TTTGTCTTTA TGGAAGCCTC TATTCGCAAG AATATCCAGC AGGCACTGCA TGAAAAAGAG ATCGCAGTGA AGGCCAGCCA GGCTAAAAGT GAATTTTTGG CGACCATGAG TCATGAGATT CGCACCCCAA TGAACGGCGT ACTGGGTATG ACTGAGCTGG TACTGGAAAC CGAACTAAGT AGCGAACAGC GTCGTTTTAT GGAAATGATC AAATCCTCCG GCTTCGGATT GCTGGATATT ATTAATGATA TTCTGGATTT TTCTAAAATT GAGGCGGGTA AACTGCAGCT GGACAACCAT CCTATGCAAT TACAGGAGCT GATTAAGCAT TTGGTTACTT CGCTTAGCCC TCTGGCTAAG AAAAAAGGAT TACAACTAAA TTATAATTTG CCCCAGGAAA TGGATACCTG GGTGCTTGGC GATAGGATTC GCTTGCGGCA GGTCTTAACT AATCTGATTA GTAATGCTAT TAAGTTTACC CAGCGTGGTG AAGTTTTGGT GTCTGCGGTC ATTTTTGAAC AGTCGGCGAC GGCGTTATCA TTGCAGATCA GGGTGCGGGA TAGTGGCATA GGTATTGCGC CTGAGAATCA GGATAAAATT TTTGAGTCAT TCTCTCAGGC TGACAGTTCA ACCACCCGTA ATTATGGTGG TACCGGATTA GGTTTGGCTA TATCCAAACA GCTGATAGAA ATGATGGGTG GAAGTATAGG CTTTAGTAGT GAGTTAGGTC AGGGAACGAC CTTCTGGTTT GACCTTAAGT TAAAGCCTAC TGAGCAGATT TTGAGTGATG AAACTTTGCC CGTAAGCACC CTTGAGCAAC AACAGATAAC ACTGCAGGGT AAGATACTGT TGGTGGAAGA TCATCCGGTT AATCAGGAAT TCGCCATGCA GATTTTGAGT GGTTTAGGTG TTGATCTGCA TTTAGCCGGG AATGGTGTCG AAGCACTGAA GCAATTAAAG GAACAAAACT ATGATCTGGT GTTGATGGAT TGCCAGATGC CGGTGATGGA TGGTTATCGG GCAACGGAGT TAATCCGTCA GAAAGAGCAG GAAAACGGAT CGCCGCGCCT ACCAATTATT GCCCTTACCG CAAACGCAAT GATCGAGGAC CGGCAGCGCT GCATCAGTGC CGGTATGGAT GATTATCTGT CCAAGCCATT TAATAAAGCG CAAATTGTAG TCCTGCTGCA GCGCTGGCTT TCTGCTGATT CAGGCTTGAT GGCGGTTGTT GAGCCTGAAA TGGCTGTTGA GAAAGCAACG GCGACGAAGG TTATTGAGCC TGAAATAGCT GTGTCAAATG AACCGCTGTT GCCTGCAATT ATTGCGCAGC TTCAGGAGAT GGATGATAAC GACGGTTTCT TTAATCGTAT TGTTGATGCT TATCTGGAAA AATCCCCTGC CGATATCGAA CAGTTAAATC AGGGGCTCGC GCGCTCCGAT CCTGAAGCAC TGCGCAAGGC GGCCCATAGT TTCAAATCCA GTAGCTATAA TCTGGGTGCT CATAAGCTGG CTGAATTGTG TAAAACGCTG GAAAAAAGGG TGCGGGATAA AGATCTTGAG GAGGCTGCAT CGCTGTGCGT AAGTATTGAT GGAGAATATC AACGGGTCAG GATGGCATTA ATTAAAATTA AAGAGAATAA TAATGCAGAA AATTCAGATG AACAGTGGAG CCATTAA
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Protein sequence | MIFTSLKFKV VALILLVLVI TSAATLYFTQ RDVGSAMLRA EQSSAENVLQ LAELNIRSSY DQLISDKIEL LTQLKKEMVQ TAKVSNSVLH EFMLLSQGGR LSKEEAQQRA KRWLSKVDYP SGDIFLFDHK GTILSSSQSK LNGVAITDIR DVKGRLIYDA MRDDQLEPRG DTAIFSWQKP WQTKPSQFMG QFLPVNGWSW TLAVVVNFDN VEQESQRKMD SIIATLTQTF TKIQIAKTGY AFLFDGDKKI LIAPPEDNLD NLDNLDKFKD TSGWLPRYSS VLDKIIAVNG KNKSAISYND PFSGDREVEV FTSYFKAFDW YLGVVVPMAE IKAPGKNLIK RQSIIIALIS LVGLAAALLL VFRISRPLNT LASYAKALPT QDFSQQNPDT IKIKRLAMKY SDEVGRLAES FVFMEASIRK NIQQALHEKE IAVKASQAKS EFLATMSHEI RTPMNGVLGM TELVLETELS SEQRRFMEMI KSSGFGLLDI INDILDFSKI EAGKLQLDNH PMQLQELIKH LVTSLSPLAK KKGLQLNYNL PQEMDTWVLG DRIRLRQVLT NLISNAIKFT QRGEVLVSAV IFEQSATALS LQIRVRDSGI GIAPENQDKI FESFSQADSS TTRNYGGTGL GLAISKQLIE MMGGSIGFSS ELGQGTTFWF DLKLKPTEQI LSDETLPVST LEQQQITLQG KILLVEDHPV NQEFAMQILS GLGVDLHLAG NGVEALKQLK EQNYDLVLMD CQMPVMDGYR ATELIRQKEQ ENGSPRLPII ALTANAMIED RQRCISAGMD DYLSKPFNKA QIVVLLQRWL SADSGLMAVV EPEMAVEKAT ATKVIEPEIA VSNEPLLPAI IAQLQEMDDN DGFFNRIVDA YLEKSPADIE QLNQGLARSD PEALRKAAHS FKSSSYNLGA HKLAELCKTL EKRVRDKDLE EAASLCVSID GEYQRVRMAL IKIKENNNAE NSDEQWSH
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