| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3319 |
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| Symbol | |
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| ID | 4625733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 4100625 |
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| End bp | 4102781 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639798429 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_944605 |
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| Protein GI | 119946925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTAA AGATGCCTTT TATAAAATTC AAGCAATCAA TAGCATGGCT CTCTTTTAGT
TTTTTATTGT TCTTACTAAC TGCCTGCAAC CCTTTTTTAC AGACCACTCA CTTAGAAAAT
ATTCAAAAGC GGGGTGATAT TATGATGGGC ACGATCAATG GATCCCTGAC TTATAGTTTT
GACGGCAGTG TTTACAGCGG TTTTGACTAT GAACTGGGCA AACAGCTCGC TGATGAGCTG
AACGTTAAAT TAACCATCAA AGAATACGCG ACATTCGAAG CGTTATTTAA GGCTTTAGAT
AATAATAAAG TGGATTTTCT CGCTGCGGGA CTGACATTAA CCCCTAAAAG AGCGCAAAAA
TATCGCAGCT CCCCTCCTTA TTATTTTGCA TCTCAAAAAT TAGTTTATCG CAAGGGCAGT
TATCGTCCTC GGGAAGCAAC AGACATTAAT GCCCCTGTCT TTGTTCTTAA AGATAGCAGC
CATGAGGAAA CACTGGACAA ATTGTTAAGC GCAATGCCTG AACTTGAAGT GAACATCTTA
GAAAATGCAG ATCAGGAGAC TTTACTGCGA AAAGTCGCCG AAGAAGAGAT TACCTTTGCC
ATTGTCGACA GCTCGACACT GGCGCAAAAA CAACTTTATT ATCCGGTTTT AACAGAAGCC
TTTACGATCT CGAAAAAGCA ACCCGTCGCC TGGTTATTGA AGCGTCACCA GGATGATACG
CTGTACTCTG CGATCATTGA ATTTATGGGT AACAGATACA ATGACCAGAC CATCGCCAAG
CTTGAAGAAA AATATTTTGG TCACGTCAGG CAGTTTGATT TTGTTGATAC AAAAGTATTT
TTACGACGCA ACCAAAGCAT CCTGCCTGAA TTTGAAAGTT TATTTAAAAA ACATGCCACA
TCTGAAGTGG ATTGGTTATT ACTCGCCGCG GTCAGTTATC AGGAATCGCA TTGGGATCCA
AAAGCCGAAT CACCCACAGG TGTTCGCGGC ATGATGATGT TAACCCTTGA TACGGCAGAT
TATATAGGTA TAAAAAACAG ATTAGATCCC GCTCAAAGTA TCAAGGGAGG TGCTGACTAT
CTAACAAAGC TCATTAAACG TCTGCCCAAT AGTATTCCTG ATGATGAAAA AATCTGGTTT
GCATTAGCCA GTTATAACCT TGGTTACGGG CATGTAATGG ATGCCCGGCG GATCACTCTG
AAGAAAAAAC AAAATCCTGA TGCATGGTCA GATGTTAAAG CAAACTTGCC ACTGCTTCAT
GAAAAAAAAT GGTATAGCCA ATCTAGATAC GGTTATGCGC GTGGGCGGGA AGCCCAACAT
TATGTCAACA ATATCCGTCA ATATTTAAAA ACATTAACCT GGTTTATTGC CGAGAGAACA
AAACAGGAGG CTGAACAAAA AATCGAACTG GCAGTACAAG CCAAGCTTGC AGCTGAACAA
AAACGGGCAG CAAAAGCCAA GCTCGAAGCT GAACAAAAAA GTAGTCCAGC AGAAAAAGCC
AAGCTGGAAG CGCAGCAAAA AATCGAACTG GCAGAAAAAG CCGAGCAGGA GGCGCAGCAA
AAAAGCAGAC TGGCAGAAAA AGCCAAGCAG GAGGCGCAGC AAAAAAGTAG ACTGGCAGAA
AAAGCCGAGC AGGAGTCTGA ACAAAAAATT GAACTGGCAG AAAAAGCCAA GCTAGAAGCT
GAACAACAAA TCGAACTGGC CGCAAAAGTT AAGCTGGAAG TTGAACAACA AATCGAACTG
GCCGCAAAAG CCAAATTGGA AGCTGAACAA CAAATCGAAC TGGCCGCAAA AGCCAAGCAG
GAGGCTGAAC AAAAAATCGA ACTGGCCGCA AAAGCTAAGC AGGAGGCTGA ACAAAAAATC
GAACTGGCCG CAAAAGCCAA GCAGGAGGCT GAACAAAAAA TCGAACTGGC CGCAAAAGCC
AAGCAGGAGG CTGAACAAGA ACTAGTGGCT AAAGCCAAAC TGGAGGATGA GCAGGAACTG
GGGGCTAAAG CCCTACTTGC AGCTGAACAG GAACCGACAG CGGAACAGGA ACCAGCAACT
GAACAGGAGC CGGCAGCTGA ACAGGAGCCG GCAGCTCAAG AAAAGAAACA GGCAGAGACC
AAAGAAGTGC AGGAGACGGA AGTCGCGACA GCAGATATAA CCGCGGTCAG CAAATAA
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| Protein sequence | MDLKMPFIKF KQSIAWLSFS FLLFLLTACN PFLQTTHLEN IQKRGDIMMG TINGSLTYSF
DGSVYSGFDY ELGKQLADEL NVKLTIKEYA TFEALFKALD NNKVDFLAAG LTLTPKRAQK
YRSSPPYYFA SQKLVYRKGS YRPREATDIN APVFVLKDSS HEETLDKLLS AMPELEVNIL
ENADQETLLR KVAEEEITFA IVDSSTLAQK QLYYPVLTEA FTISKKQPVA WLLKRHQDDT
LYSAIIEFMG NRYNDQTIAK LEEKYFGHVR QFDFVDTKVF LRRNQSILPE FESLFKKHAT
SEVDWLLLAA VSYQESHWDP KAESPTGVRG MMMLTLDTAD YIGIKNRLDP AQSIKGGADY
LTKLIKRLPN SIPDDEKIWF ALASYNLGYG HVMDARRITL KKKQNPDAWS DVKANLPLLH
EKKWYSQSRY GYARGREAQH YVNNIRQYLK TLTWFIAERT KQEAEQKIEL AVQAKLAAEQ
KRAAKAKLEA EQKSSPAEKA KLEAQQKIEL AEKAEQEAQQ KSRLAEKAKQ EAQQKSRLAE
KAEQESEQKI ELAEKAKLEA EQQIELAAKV KLEVEQQIEL AAKAKLEAEQ QIELAAKAKQ
EAEQKIELAA KAKQEAEQKI ELAAKAKQEA EQKIELAAKA KQEAEQELVA KAKLEDEQEL
GAKALLAAEQ EPTAEQEPAT EQEPAAEQEP AAQEKKQAET KEVQETEVAT ADITAVSK
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