Gene Ping_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3314 
Symbol 
ID4625764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4087521 
End bp4088582 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content40% 
IMG OID639798424 
Producthypothetical protein 
Protein accessionYP_944600 
Protein GI119946920 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATG CCTCCTCCTT TGCGCGCAGT GCAATATTTT TTTCTGCAAT TGTGATCTCA 
CTTGCCGGTG TAAAAGTTGC GGCGCCTATT GTTGTGCCTT TTTTACTGGC ACTCTTTGTT
GCTATTATTT GTAATCCTGC CGTTGACTTT TTATCGGCAC GCAGAATTCC TCGGGGTATT
GCTATTGCCT GCGTCATTTT CTTTATTTTT GCCATTTTTT TTGGTTTTGG GGGCGTTATT
GGTGCAGCAG TTAATGGCTT TAGAGAGGCA ATTCCTACCT ATGAAGCTCA ATTTGCGGTC
GAACTGCAAT GGTTCATTGC TAAAATGAGT GAATATAATA TTGTTATTTC GATGACCGCG
GTACGAGAAT ACTTTGATCC CGCAAAAATA ATGACCCTAG TAACAAGCAC GTTAAGCAGT
TTCAGCAGCG TGTTGGGCAA TGTATTCCTG TTGTTATTAA CCGTGGTATT TATGCTCTCG
GAAGGTGGTG GTTTTGCCAA AAAACTGCAT ATCGCTTTTG ATGACTCGGT CAAAACGGAA
AAGCGCTTAG ATCATTTTTT AAAGTCAGTG AATAAATATA TGGCCATCAA AACGATAATG
AGCTTAATGA CCGGTTTAAT GATTGGTTTT GCTTTATGGC TGATGGGCGT CGATTTTTAT
GTGTTATGGG CTTTACTGGC TTTTTTATTA AACTATATAC CCAATATAGG CTCAATTATT
GCGGCGGTGC CAGCGGTTAT TTTAACTTTT TTACAACTTG GTATGGGTTA TGCAGCAGCG
GTGATCGCTT TGTTTGTTGG CGTTAATACG CTGATGGGGA ATGTCATTGA GCCTAGGTTT
ATGGGCCGCA GCCTCGGGCT TTCAACTCTG GTGGTCTTTC TGTCATTAAT TTTTTGGGGG
TGGTTATTAG GCATGGTAGG GATGCTACTA TCTGTGCCTT TGACCATGAT TTTTAAAATA
GCATTAGAAA ATAGTGAAGA GGGACGTTGG TTTGCTATTT TATTAAGCTC CGATGAAGAA
CTCGAAGATT TTCAAGCAAC CAAACAACAA GATAATAAAT AA
 
Protein sequence
MSNASSFARS AIFFSAIVIS LAGVKVAAPI VVPFLLALFV AIICNPAVDF LSARRIPRGI 
AIACVIFFIF AIFFGFGGVI GAAVNGFREA IPTYEAQFAV ELQWFIAKMS EYNIVISMTA
VREYFDPAKI MTLVTSTLSS FSSVLGNVFL LLLTVVFMLS EGGGFAKKLH IAFDDSVKTE
KRLDHFLKSV NKYMAIKTIM SLMTGLMIGF ALWLMGVDFY VLWALLAFLL NYIPNIGSII
AAVPAVILTF LQLGMGYAAA VIALFVGVNT LMGNVIEPRF MGRSLGLSTL VVFLSLIFWG
WLLGMVGMLL SVPLTMIFKI ALENSEEGRW FAILLSSDEE LEDFQATKQQ DNK