Gene Ping_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3307 
Symbol 
ID4625757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4077834 
End bp4080119 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content43% 
IMG OID639798417 
Productformate acetyltransferase 
Protein accessionYP_944593 
Protein GI119946913 
COG category[C] Energy production and conversion 
COG ID[COG1882] Pyruvate-formate lyase 
TIGRFAM ID[TIGR01255] formate acetyltransferase 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.220924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGA TTAATGAAGA ATTGGCATCA GCATGGCAAG GTTTTGCTGG TGAAGTTTGG 
AAAACTGACG TTAACGTACG TGACTTCATC CAAAAAAACT ATACCCCCTT TGAAGGTGAT
GAAAGTTTCC TGGCGGGTGC AACCCAAGCC ACTGATGCGC TTTGGGCTAA GGTGATGGAA
GGCATCAAAC TGGAAAACAG CACCCATGCG CCAGTTGATT TCGATACTGA TATTGTTTCT
ACCATTACCG CTCATGACGC AGGTTATATC AACCAAGATT TAGAAACCAT TGTTGGTCTG
CAAACCGATG CGCCTTTAAA ACGTGCGATT ATCCCTAACG GCGGTATTCG TATGATCGAT
GGTTCTTGTA AAGTTTATGG TAAAGAGCTC GATCCAACTA TTAATAAAAT TTACTCTGAA
TTCCGTAAAA CACATAATCA GGGTGTTTTT GATGTTTACA CAGGTGACAT CCTAAAATGT
CGTAAATCAG GTATCTTAAC CGGTTTGCCC GATGCTTATG GTCGTGGTCG TATTATCGGT
GATTACCGTC GTGTTGCCCT GTACGGAATT GACTTCCTAA TGACCGATAA AGCGGAGCAG
CATAAAAGCT TAGAAAAAGA TTTACTTGCC GGAGCAACAC TTGAAGATAC CCTGAAATTA
CGTGAAGAGA TCTTTGAGCA ATACCGTGCA CTAGCACAAA TTAAAGAGAT GGCGGCTAAA
TACGGCTCGG ATATCTCTCG TCCTGCACAA AATGCGAAAG AAGCCATTCA ATGGACTTAC
TTTGGTTATC TGGCGGCAAT CAAATCACAA AATGGCGCAG CAATGTCATT TGGTCGTACT
ATGAGTTTCC TTGATATCTA TATTGAAAAA GATATGCAGG CAGGTGTACT TACCGAGACT
GAAGCACAAG AGCTTATCGA TCACTTGGTC ATGAAATTAC GTATGGTACG TTTCCTACGT
ACACCTGAAT ACGATGATCT GTTCTCCGGC GACCCTATCT GGGCAACGGA GTCTATTGGC
GGCATGGGCG TTGACGGGCG TACGCTAGTG ACTAAAAGCA GCTTCCGTAT TCTGCATACA
CAATACACTA TGGGCCCTTC TCCAGAGCCG AACATTACTG TTTTATGGTC TGAAGCATTA
CCTGTTAACT TTAAAAAATA CTGTGCAAAA GTATCGATTG ATACTTCCTC TATTCAGTAT
GAAAATGATG ACTTGATGCG CAGCAATTTT GATAACGATG ATTACGCTAT CGCCTGTTGT
GTATCCCCTA TGATTGTCGG TAAGCAGATG CAGTTCTTTG GTGCGCGTGC CAACCTTGCT
AAAACCTTGC TTTACGCCAT TAACGGCGGC GTAGATGAAA AATCTAAAGT GCAGGTTGGT
CCTAGTACAT TGCCTGCAAT TACCTCTGAA GTCTTAGATT ATGATGAAGT ATTTGCGAAC
CTTGACCACT TTATGGAATG GTTAGCTGAA ACCTACGTCA CTGCACTTAA CTGTATTCAT
TATATGCATG ACAAATACAG TTATGAAGCA TCGCTAATGG CACTGCACGA TCGTGATGTT
GAACGTACTA TGGCTTGTGG TATTGCCGGT CTTTCAATTG CAGCTGATTC ACTTTCTGCC
ATAAAATACG CAACCGTTAA ACCTGTCCGT GATGAAGACG GTATTGCAAC TGATTTTGAG
ATCGAAGGTG ATTACCCTAA ATTTGGTAAC AATGACCCGC GTGTAGATGA CATGGCTTGT
GATCTTGTTG AACGTTTTAT GAAAAAAATT CAATCGCACA AAATGTACCG CAATGCACGT
GCGACTCAAT CTATCCTTAC TATTACTTCT AACGTGGTAT ACGGTAAAAA AACCGGTAAC
ACACCTGATG GACGTCGTTC TGGCATGCCC TTTGCGCCTG GTGCTAACCC CATGCATGGT
CGTGATGAAA AGGGTGCGGT TGCATCATTA ACCTCTGTTT CTAAACTGCC ATTTTCCTAC
GCACAGGATG GTATTTCATA TACTTTCTCG ATTGTACCAA ATGCATTAGG TAAAACTGAC
GATTCACAAA AAACAAACTT AGCGGGTCTG ATGGACGGTT ACTTTAAGCA CACCCCTGAG
ATTGAAGGTG GTCAGCACTT AAACGTAAAC GTGATGAACC GTGAAATGCT GGTTGATGCA
ATGGATAATC CTGAAAAATA CCCGCAGTTG ACTATCCGTG TTTCTGGTTA TGCAGTACGT
TTTAACTCGT TAACTAAAGA ACAGCAAAGC GATGTGATTT CACGTACCTT TACTGCCAGG
TTGTAA
 
Protein sequence
MTKINEELAS AWQGFAGEVW KTDVNVRDFI QKNYTPFEGD ESFLAGATQA TDALWAKVME 
GIKLENSTHA PVDFDTDIVS TITAHDAGYI NQDLETIVGL QTDAPLKRAI IPNGGIRMID
GSCKVYGKEL DPTINKIYSE FRKTHNQGVF DVYTGDILKC RKSGILTGLP DAYGRGRIIG
DYRRVALYGI DFLMTDKAEQ HKSLEKDLLA GATLEDTLKL REEIFEQYRA LAQIKEMAAK
YGSDISRPAQ NAKEAIQWTY FGYLAAIKSQ NGAAMSFGRT MSFLDIYIEK DMQAGVLTET
EAQELIDHLV MKLRMVRFLR TPEYDDLFSG DPIWATESIG GMGVDGRTLV TKSSFRILHT
QYTMGPSPEP NITVLWSEAL PVNFKKYCAK VSIDTSSIQY ENDDLMRSNF DNDDYAIACC
VSPMIVGKQM QFFGARANLA KTLLYAINGG VDEKSKVQVG PSTLPAITSE VLDYDEVFAN
LDHFMEWLAE TYVTALNCIH YMHDKYSYEA SLMALHDRDV ERTMACGIAG LSIAADSLSA
IKYATVKPVR DEDGIATDFE IEGDYPKFGN NDPRVDDMAC DLVERFMKKI QSHKMYRNAR
ATQSILTITS NVVYGKKTGN TPDGRRSGMP FAPGANPMHG RDEKGAVASL TSVSKLPFSY
AQDGISYTFS IVPNALGKTD DSQKTNLAGL MDGYFKHTPE IEGGQHLNVN VMNREMLVDA
MDNPEKYPQL TIRVSGYAVR FNSLTKEQQS DVISRTFTAR L