Gene Ping_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3306 
Symbol 
ID4625756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4076889 
End bp4077758 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content43% 
IMG OID639798416 
Productformate/nitrite transporter 
Protein accessionYP_944592 
Protein GI119946912 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0326166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.791558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAG AAAATAAACG AGAAGAACTA CTGCCTCATC AACTAACCGA AAAAGCCGCT 
GACGTTGCAT ATAATAAAGC AACTAAAGCT CCCCTATCCG CTTTTTACCT CGCGATTACT
GCAGGTCTTT TTATCGGCCT CGCTTTTGTT TTTTATGTCA CCGTCACCAC AGGCACTGAA
AATGTCGCTT GGGGTCTTAG TAAATTTGCA GGTGGAGCAG CATTTAGTCT TGGTCTACTA
TTAATCGTTG TCGTGGGCGG TGAACTATTC ACCAGCAGCA CGCTGACCCT GATAGCGAAA
GCGAGCAAAC GTATCACGAC AGCACAACTG CTTAAAAACT GGATCATTGT TTATTTTGGT
AATTTTATTG GCGCAACCTT CCTTGTTTTC CTGATCTTTT TTGCGGGAAT GTACAATACA
GATCACGGGC AATGGGGATT AACAGTCTTA CATATTGCCC AGCATAAACT CCATCATTCA
TCTATAGAGG CCGTTTCACT GGGTATTTTA TGTAATATGA TGGTTTGTCT GGCAGTGTGG
ATGGCATTTG CCGCACGCAC TATTACCGAT AAAATGTTTG CCGTATTTCT ACCTGTCACC
ATGTTTGTCG CCTCCGGTTT TGAGCATAGT ATTGCCAATA TGTTTATGGT GCCCAGCGGC
ATTTTAATCC AGCAATTTGC TCCCGCAGAA TTTTGGCTCG CTATCGGAGA GCACACCAGC
CAATATTCTG ATTTAACAAT TTACAACTTT ATTTTCGATA ACCTAATTCC GGTGACCATC
GGTAACATTA TTGGCGGCGG CGTAATAGTA GGTTTAATGC ACTGGATGAT CTATTTACGT
CCAATGCAGA AAAGCAAACA AGAACAATAG
 
Protein sequence
MLAENKREEL LPHQLTEKAA DVAYNKATKA PLSAFYLAIT AGLFIGLAFV FYVTVTTGTE 
NVAWGLSKFA GGAAFSLGLL LIVVVGGELF TSSTLTLIAK ASKRITTAQL LKNWIIVYFG
NFIGATFLVF LIFFAGMYNT DHGQWGLTVL HIAQHKLHHS SIEAVSLGIL CNMMVCLAVW
MAFAARTITD KMFAVFLPVT MFVASGFEHS IANMFMVPSG ILIQQFAPAE FWLAIGEHTS
QYSDLTIYNF IFDNLIPVTI GNIIGGGVIV GLMHWMIYLR PMQKSKQEQ