Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3304 |
Symbol | |
ID | 4625754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4075113 |
End bp | 4076009 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798414 |
Product | tyrosine recombinase XerD |
Protein accession | YP_944590 |
Protein GI | 119946910 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0133185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.394454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAT TAAGCATCGA TCAATTTTTA GATTCATTAT GGTTAGAGAG GGGATTGTCA CAAAATACCT TAGAATCATA TCGCCACGAT TTACGTTTGG TTGAAATTTT TCTTGCCACA AGATTGGTTA GTTTATGCTC TGCCTCGTCG TTAGATTTAA TTGATTATTT TAGTTGTCGT CTGAGCGGAG AGAAAGAATA TAAAAATGCA TCAACTGCGC GTTTAATGAG TGCCTTACGC CGTTATTATC AATATTTATG CCGCGAAAAA ATACGCGAGG ATGATCCCAG TGCTAAGCTG GAAAGCCCTA AAATAATCAA ACCCTTACCT AAGTCACTTT CAGAATCCGA AGTTGACGGA TTATTATCCT CACCAGATTT AACCGACAGT GTTCAATTTC GAGATAAAGC CATGCTTGAG CTTCTCTACG CGACGGGTTT GCGCGTTTCC GAGTTAGTTG GATTGTCGAT GGAGGAGATC AATTTAAAAC AAGGTGTTGT GCGCGTTACC GGGAAGGGTG ATAAAACGCG TTTGGTACCA TTAGGAGAAG AGGCCATCTA CTGGGTTGAG CGTTATATAG AGGAAGCGCG GCCAGATCTG TTAAAGGGTC AAAGCAGCGA CGTGTTATTT CCAAGCCGTC GCGCAACGGT GATGGTGAGA CAAACATTTT GGCATCGCAT TAAATTTTAT GCCCAATTAT GCGGCATAGA TAAAGAAGCG TTATCCCCGC ATGTATTGCG TCATGCCTTT GCAACACACT TATTAAATTA TGGGGCAGAT CTGCGTGTGG TGCAGATGCT ATTGGGGCAT AGTAATCTTT CTACAACGCA GATTTACACG CATATTGCAC AAGACAGATT GAAAGAGCTG CATCAGGAGC ATCATCCAAG GGCATAA
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Protein sequence | MEALSIDQFL DSLWLERGLS QNTLESYRHD LRLVEIFLAT RLVSLCSASS LDLIDYFSCR LSGEKEYKNA STARLMSALR RYYQYLCREK IREDDPSAKL ESPKIIKPLP KSLSESEVDG LLSSPDLTDS VQFRDKAMLE LLYATGLRVS ELVGLSMEEI NLKQGVVRVT GKGDKTRLVP LGEEAIYWVE RYIEEARPDL LKGQSSDVLF PSRRATVMVR QTFWHRIKFY AQLCGIDKEA LSPHVLRHAF ATHLLNYGAD LRVVQMLLGH SNLSTTQIYT HIAQDRLKEL HQEHHPRA
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